RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Fabp1P12710 127 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 H2-Q7P14429 334 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 H2-Q9P14431 200 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ints14Q8R3P6 515 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Epb41l4bQ9JMC8 527 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Il18rapQ9Z2B1 614 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3159K7N760 267 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 CyctP00015 105 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Yap1P46938 488 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr1477Q7TQQ7 315 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 4933430I17RikQ8BHW4 495 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pxdc1Q8JZU6 231 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lrrc42Q8R2U7 421 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Washc1Q8VDD8 475 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Riok2Q9CQS5 547 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam90a1bQ9D4F3 419 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cmpk1Q9DBP5 196 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prmt2Q9R144 448 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smarcb1Q9Z0H3 385 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gh1P06880 216 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 FauP35545 74 aaKnown RBP11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Arpc4P59999 168 aaKnown RBP11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 HmgcrQ01237 887 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Csn1s2aQ02862 184 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc39a10Q6P5F6 833 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zswim5Q80TC6 1188 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tcam1Q99NB3 548 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Btnl4A2CG29 586 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 QrfprP83861 433 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 HecaQ3V1N5 544 aaKnown RBP11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Exd1Q8CDF7 570 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Asb17Q8VHP9 295 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 MecrQ9DCS3 373 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prokr1Q9JKL1 393 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kidins220E9Q9B7 1793 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 PenkP22005 268 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ggta1P23336 394 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Irf3P70671 419 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr681Q3SXH8 315 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Snx27Q3UHD6 539 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 StyxQ60969 223 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smad3Q8BUN5 425 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Galnt13Q8CF93 556 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr679Q8VGV0 315 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Klk6Q91Y82 253 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 PompQ9CQT5 141 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hddc3Q9D114 179 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cmtm7Q9ESD6 167 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pias4Q9JM05 507 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 PplQ9R269 1755 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 KantrA0A1W2P7I0 76 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc25a25A2ASZ8 469 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 PnpP23492 289 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gabrr2P56476 465 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pld2P97813 933 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cep76Q0VEJ0 659 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Uckl1Q91YL3 548 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 QpctQ9CYK2 362 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ift43Q9DA69 206 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ighv11-1A0A075B5R6 117 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp938E9Q9G3 579 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 2610001J05RikF2Z3Y9 59 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm5145F8VQ88 278 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kng1O08677 661 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Snx3O70492 162 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Itgb1P09055 798 aaKnown RBP11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mkl2P59759 1080 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Adam29Q811Q4 763 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ppm1lQ8BHN0 360 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Acot4Q8BWN8 421 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Syt15Q8C6N3 418 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmem259Q8CIV2 574 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Clec4aQ9QZ15 238 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ate1Q9Z2A5 516 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dcpp2E9PYC2 171 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r48E9Q5D8 855 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8229K7N749 213 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dcpp1L7N1X9 171 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cyp2a5P20852 494 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Klhl8P59280 629 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lhx5P61375 402 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kat7Q5SVQ0 613 aaKnown RBP11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 RadxQ8C779 850 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tchhl1Q9D3P1 638 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ccdc3Q9D6Y1 273 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Igdcc4Q9EQS9 1252 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ca5bQ9QZA0 317 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 0610012G03RikA0A0J9YTR2 95 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q3UK37 420 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 MslnQ61468 625 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tas2r38Q7TQA6 331 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 FicdQ8BIX9 458 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ptk7Q8BKG3 1062 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmem161bQ8C2L6 487 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lin52Q8CD94 116 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mkl1Q8K4J6 964 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rbm18Q9CR83 190 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 EurlQ9D7G4 290 aa11.78□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam171a2A2A699 822 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r90E9PXJ8 863 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms