RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Fastkd5Q7TMV3 762 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Med26Q7TN02 588 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Clec18aQ7TSQ1 534 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 IrgcQ8C262 412 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Q8C4P0 716 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Wdr47Q8CGF6 920 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gprc6aQ8K4Z6 928 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Chchd4Q8VEA4 139 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fam192aQ91WE2 254 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Clvs1Q9D4C9 354 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Oser1Q9D722 291 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Bpifa3Q9D9J8 232 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sgk2Q9QZS5 367 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dlc1Q9R0Z9 1092 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Jmjd1cQ69ZK6 2350 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 PoleQ9WVF7 2283 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm21083A0A0G2JFD5 256 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 4932443I19RikA0A286YE38 169 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mup18A2BIM8 181 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm10639E9Q6L7 222 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr726E9Q8X3 321 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm340F6RGI3 1242 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 A630095N17RikJ3KMM7 116 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 OmdO35103 423 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mup11P04938 181 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cd4P06332 457 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gsta2P10648 222 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Spp1P10923 294 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tgm2P21981 686 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sar1aP36536 198 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr725Q05A45 321 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rad51Q08297 339 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 ZufspQ3T9Z9 577 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm21320Q4FZE8 181 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Adad1Q5SUE7 619 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Xlr3aQ60595 226 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Bcap31Q61335 245 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Nr0b2Q62227 260 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Foxl1Q64731 336 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm5414Q6IFZ8 552 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Itln1bQ80ZA0 313 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 FicdQ8BIX9 458 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Chrnb3Q8BMN3 464 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Plekho2Q8K124 495 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp2u1Q9CX98 530 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp773Q9CZ29 471 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CrotQ9DC50 612 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tsga8Q9JJL0 238 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Grm3Q9QYS2 879 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Copg1Q9QZE5 874 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 B9d1Q9R1S0 204 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sh3pxd2bA2AAY5 908 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sdccag3A2AIW0 432 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm15821A6X8J8 139 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm3542K7N6U2 270 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Kpna4O35343 521 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Folh1O35409 752 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Epas1P97481 874 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Arhgap45Q3TBD2 1116 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rcsd1Q3UZA1 412 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Spag6Q3V0U9 509 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Als2clQ60I26 952 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Capn11Q6J756 714 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Acap2Q6ZQK5 770 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr295Q7TS08 309 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rspo2Q8BFU0 243 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Krr1Q8BGA5 380 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dlgap2Q8BJ42 1059 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Klhl38Q8BSF5 581 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp398Q8BV16 643 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Bpifb2Q8C1E1 462 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mptx1Q8R1M8 219 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 ClyblQ8R4N0 338 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pcyt2Q922E4 404 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mta3Q924K8 591 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Bcl7aQ9CXE2 210 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 FopnlQ9CZS3 174 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tuba8Q9JJZ2 449 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 SpegQ62407 3262 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ptprz1B9EKR1 2312 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Igkv10-95A0A0G2JFY3 115 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp963D3Z2T8 383 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp169E9Q3R6 731 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm3402K7N5P2 326 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slc32a1O35633 525 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Timp2P25785 220 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Psmb9P28076 219 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Lim2P56563 173 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Arpc4P59999 168 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mdga1Q0PMG2 940 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CdonQ32MD9 1250 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Heatr9Q5QNV8 569 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Eif2s1Q6ZWX6 315 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Btnl1Q7TST0 509 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tbx10Q810F8 385 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 H2-M10.5Q85ZW7 330 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sephs1Q8BH69 392 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 4921511C20RikQ8BVT7 469 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ythdf3Q8BYK6 585 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Galnt5Q8C102 930 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms