RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Zfp956Q3UZY6 572 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 TsnQ62348 228 aaKnown RBP22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Irf4Q64287 450 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gpr26Q8BZA7 337 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Sult5a1Q91X36 291 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Trim7Q923T7 510 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Wdr73Q9CWR1 371 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ilf2Q9CXY6 390 aaKnown RBP22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Lmx1aQ9JKU8 382 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ptk2bQ9QVP9 1009 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Med20Q9R0X0 212 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gria3Q9Z2W9 888 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pot1bH7BX60 640 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 EsrraO08580 422 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Slc11a1P41251 548 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pim3P58750 326 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Abce1P61222 599 aaKnown RBP22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Bpifa1P97361 278 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Il17aQ62386 158 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Zswim9Q6DI92 447 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Psmd11Q8BG32 422 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cnpy4Q8BQ47 245 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Clasp2Q8BRT1 1286 aaKnown RBP22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Defb22Q8BVC1 179 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Parp12Q8BZ20 711 aaKnown RBP22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Plekho2Q8K124 495 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Rnh1Q91VI7 456 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pbld2Q9CXN7 288 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Klhl35Q9CZ49 574 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ube4bQ9ES00 1173 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gm16494E9Q2Z4 87 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gm3159K7N760 267 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cyp2j6O54750 501 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Mcpt1P11034 246 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Rbp1Q00915 135 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Shcbp1lQ3TTP0 639 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pnpla1Q3V1D5 599 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Adora2aQ60613 410 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Caprin1Q60865 707 aaKnown RBP22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Clec4b1Q7TS58 209 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Zfp606Q7TSV0 794 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Adamtsl4Q80T21 1036 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 MdficQ8BX65 247 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cys1Q8R4T1 145 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ssx2ipQ8VC66 615 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Creld1Q91XD7 420 aa22.46■■□□□ 1.19
Upf3a-201ENSMUST00000043767 CerklA2AQH1 525 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Zbed5B2RPU8 756 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gm3594E9Q2A7 267 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Vmn2r22E9Q7S8 853 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 WarsP32921 481 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Tac1P41539 130 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Rabl6Q5U3K5 725 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Eps15l1Q60902 907 aaKnown RBP22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Stk-ps2Q8C0V7 499 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Lin52Q8CD94 116 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 CcinQ8CDE2 588 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Crispld1Q8CGD2 500 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Map3k21Q8VDG6 1002 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Pcdhga9Q91XX9 932 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 SmtnQ921U8 923 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 P2yr13Q9D8I2 337 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Dmap1Q9JI44 468 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Tp73Q9JJP2 631 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Ndrg2Q9QYG0 371 aaKnown RBP22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Col6a3E9PWQ3 3284 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gm28729A0A1B0GSW2 409 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Syn1O88935 706 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Cyp21P03940 487 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Atp1b2P14231 290 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 SgcgP82348 291 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Kir3dl1P83555 432 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 G3bp2P97379 482 aaKnown RBP22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Smad4P97471 551 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Pcnx4Q3UVY5 1174 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Defb48Q3UW22 87 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Armc5Q5EBP3 926 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Clhc1Q5M6W3 596 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 PianpQ6P1B3 278 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Kif18bQ6PFD6 834 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Svs1Q6WIZ7 820 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Olfr1152Q7TR34 310 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Pcmtd2Q8BHD8 359 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Ccdc151Q8BSN3 593 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Wwp1Q8BZZ3 918 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Adprhl2Q8CG72 370 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Znf628Q8CJ78 1038 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Slco4a1Q8K078 723 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Slc5a11Q8K0E3 673 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Cops8Q8VBV7 209 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Mul1Q8VCM5 352 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Krt6bQ9Z331 562 aa22.45■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Znf318Q99PP2 2237 aa22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Eif2b3B1AUN2 452 aaKnown RBP22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Gm4969D3YZT1 566 aa22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 4930455H04RikD3Z622 58 aa22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Zfp788E9Q980 884 aa22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Sec22bO08547 215 aaKnown RBP22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 MaxP28574 160 aa22.44■■□□□ 1.18
Upf3a-201ENSMUST00000043767 Myo1gQ5SUA5 1024 aa22.44■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms