RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm45233A0A0N4SVE0 221 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 A0A1L1STL9 112 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Col9a3A2ACT7 680 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Btnl6A2CG22 539 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r168K7N6B6 309 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r2L7N2E9 908 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atn1O35126 1175 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atp6v1b2P62814 511 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 PepdQ11136 493 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Shcbp1lQ3TTP0 639 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 TchpQ3TVW5 497 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fzd4Q61088 537 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 MdficQ8BX65 247 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zfp57Q8C6P8 421 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arhgap29Q8CGF1 1266 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Otud7aQ8R554 926 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Recql5Q8VID5 982 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lgals12Q91VD1 314 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prb1Q91X93 504 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lrrc4Q99PH1 652 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arl8bQ9CQW2 186 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arpc2Q9CVB6 300 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tmbim4Q9DA39 238 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam13cQ9DBR2 601 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc23a2Q9EPR4 648 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hapln1Q9QUP5 356 aaKnown RBP8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atp6ap1Q9R1Q9 463 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gipc1Q9Z0G0 333 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r2A2AMT6 306 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 4931406B18RikA2RSL7 367 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 4930455H04RikD3Z622 58 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Galnt9G3X942 604 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prdx1P35700 199 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 IduaP48441 634 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ezh1P70351 747 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rsrp1Q3UC65 298 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc6a3Q61327 619 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Map2k2Q63932 401 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arhgap20Q6IFT4 1182 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ccdc50Q810U5 305 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Echs1Q8BH95 290 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cfap20Q8BTU1 193 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cndp1Q8BUG2 492 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 4932414N04RikQ8CEQ9 752 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr1176Q8VG40 315 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Adgrl4Q923X1 739 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mrpl1Q99N96 336 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trim12aQ99PQ1 284 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr704Q9EPF6 315 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nipa2Q9JJC8 359 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Arl10Q9QXJ4 243 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 SufuQ9Z0P7 484 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nfs1Q9Z1J3 459 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Crybg1A0A0G2JG52 2065 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tada2bD3Z4Z0 420 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr891E9Q843 316 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 2210016F16RikG3X8U3 338 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kcnk4O88454 398 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mcpt2P15119 244 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 PctpP53808 214 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 GuloP58710 440 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Adra1bP97717 514 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 H2-M3Q31093 336 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm5460Q3UQ97 254 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm5800Q497L3 186 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc25a51Q5HZI9 298 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Itih1Q61702 907 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lrrc8eQ66JT1 795 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kirrel1Q80W68 789 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 C2cd2lQ80X80 706 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cep57Q8CEE0 500 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rdh13Q8CEE7 334 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ssh3Q8K330 649 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hbp1Q8R316 516 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr357Q8VFP4 308 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gjd3Q91YD1 278 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 PclafQ9CQX4 110 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Snx7Q9CY18 387 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vps35Q9EQH3 796 aaKnown RBP8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 CdylQ9WTK2 593 aa8.54□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm6509A0A0J9YUV1 481 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm14401A2ARV7 303 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr1188A2AV10 312 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cped1B2RX70 1026 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Serpina3jD3Z451 420 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm6351K9J7D1 481 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Matn2O08746 956 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dnajb3O35723 242 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Il1rl1P14719 567 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 ItgalP24063 1163 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hcrtr1P58307 416 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rpl10lP86048 214 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sec24aQ3U2P1 1090 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ampd1Q3V1D3 745 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Armc5Q5EBP3 926 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 CcnjlQ5SRT8 387 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sim1Q61045 765 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vat1Q62465 406 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Capn3Q64691 821 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q6P2K3 674 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms