RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 G430095P16RikE9Q913 147 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Speer4eK7N6S8 255 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 MntO08789 591 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Clcn7O70496 803 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc6a20bO88575 635 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 EnpepP16406 945 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Stfa3P35173 103 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Syt4P40749 425 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 S100a13P97352 98 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Naa11Q3UX61 218 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Wnt8aQ64527 354 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Brsk2Q69Z98 735 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ints6Q6PCM2 883 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vrk2Q8BN21 503 aaKnown RBP9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Elmo1Q8BPU7 727 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Thap1Q8CHW1 210 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tma7Q8K003 64 aaKnown RBP9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc6a20aQ8VDB9 592 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Arhgef3Q91X46 524 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ddx50Q99MJ9 734 aaKnown RBP9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Efhc2Q9D485 750 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cab39lQ9DB16 337 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Piwil1Q9JMB7 862 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Sipa1l3G3X9J0 1776 aa9.79□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zfp811A0A0J9YU71 552 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mllt3A2AM29 569 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm3476K7N6V0 257 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr1022L7MTT3 315 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Kcnn4O89109 425 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ckmt1P30275 418 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc22a15Q504N2 544 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Spata13Q5DU57 656 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam71bQ5STT6 665 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fstl1Q62356 306 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 UnkQ8BL48 810 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Hat1Q8BY71 416 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Chil4Q91Z98 402 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rin1Q921Q7 763 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mrps17Q9CQE3 120 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tchhl1Q9D3P1 638 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dusp26Q9D700 211 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Haus5Q9D786 619 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fabp12Q9DAK4 132 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Osbpl3Q9DBS9 855 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tmem176aQ9DCS1 244 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 PyglQ9ET01 850 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 CtsrQ9JIA9 334 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rdh11Q9QYF1 316 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rfc2Q9WUK4 349 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 A0A286YDU1 74 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm4907B1AXB9 411 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vmn2r50E9PW61 861 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm11236J3QMS7 360 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Hsd17b10O08756 261 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cldn5O54942 218 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cd2P08920 344 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cdh3P10287 822 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Svs4P18419 113 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cdkl4Q3TZA2 342 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Naf1Q3UMQ8 489 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zswim9Q6DI92 447 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ldoc1Q7TPY9 151 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Sephs1Q8BH69 392 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 PdhxQ8BKZ9 501 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ccdc17Q8CE13 565 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Sgpl1Q8R0X7 568 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr570Q8VH12 312 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc5a2Q923I7 670 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cby3Q9CVN6 235 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Nudt14Q9D142 222 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 NtsQ9D3P9 169 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Kcne2Q9D808 123 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tmem174Q9DCX7 243 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gpr45Q9EQQ4 373 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Wdr61Q9ERF3 305 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dnajb9Q9QYI6 222 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Scn3aA2ASI5 1947 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Bclaf3A2AG58 752 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tsga10ipF7A1F0 157 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ccl26F8VQM2 93 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pgk1P09411 417 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cdh4P39038 913 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam189a2Q4FZH1 290 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zfp78Q5U406 512 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mapk10Q61831 464 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slco2b1Q8BXB6 683 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dppa4Q8CCG4 296 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 FlcnQ8QZS3 579 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 D8Ertd738eQ8R1F0 94 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Barhl2Q8VIB5 384 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rnh1Q91VI7 456 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pcdhac1Q91Y10 964 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rpl17Q9CPR4 184 aaKnown RBP9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slamf1Q9QUM4 343 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Znf354bQ9QXT9 601 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr1049A2ARZ0 308 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm17555F6U8B9 371 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm10721J3QPJ9 223 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm17174M0QWQ9 212 aa9.78□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Coro1aO89053 461 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms