RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ccdc3Q9D6Y1 273 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ddi1Q9DAF3 408 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Amdhd1Q9DBA8 426 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Slc29a1Q9JIM1 460 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Nt5cQ9JM14 200 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tk2Q9R088 270 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Snx1Q9WV80 522 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Carm1Q9WVG6 608 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ddx39bQ9Z1N5 428 aaKnown RBP11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gipc2Q9Z2H7 314 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Vmn2r25W4VSP2 855 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Syndig1A2ANU3 258 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Slfn8B1ARD8 910 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gm10260F6YVP7 152 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gm3424L7N298 263 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gm8246M0QWX9 263 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Il1aP01582 270 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Bmp7P23359 430 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 MaxP28574 160 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Sstr1P30873 391 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Pdha2P35487 391 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Vps4bP46467 444 aaKnown RBP11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ApodP51910 189 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 F8a1Q00558 380 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 G6pdxQ00612 515 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tex35Q14BK3 207 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Kdm4dQ3U2K5 510 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fbxo7Q3U7U3 523 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Lin28bQ45KJ6 247 aaKnown RBP11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ccdc157Q5SPX1 718 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cntn4Q69Z26 1026 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Hbs1lQ69ZS7 682 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Q6GQU0 248 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Q6P1I3 445 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Rad54bQ6PFE3 886 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ppp2r1bQ7TNP2 601 aaKnown RBP11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Olfr384Q7TRX8 312 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Vrk1Q80X41 440 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 NapepldQ8BH82 396 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Elmo1Q8BPU7 727 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ubald2Q8BQH4 164 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Adam4Q8CGQ2 763 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 TwnkQ8CIW5 685 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ahi1Q8K3E5 1047 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Spag16Q8K450 639 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Stx19Q8R1Q0 292 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Olfr606Q8VGZ8 319 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Depdc7Q91WS7 511 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Adgrl4Q923X1 739 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 LsrQ99KG5 594 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ten1Q9D7K2 161 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Arr3Q9EQP6 381 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Kdelc1Q9JHP7 502 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 XkQ9QXY7 446 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Eif2s3yQ9Z0N2 472 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tep1P97499 2629 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Sdk2Q6V4S5 2176 aa11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cnot1Q6ZQ08 2375 aaKnown RBP11.1□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gm29133A0A1B0GT72 266 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Btnl6A2CG22 539 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Trgv2A2J008 116 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tmem45a2B7ZWJ5 289 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tada2bD3Z4Z0 420 aaKnown RBP11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ChrngP04760 519 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Oprd1P32300 372 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Guca1aP43081 202 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ccr3P51678 359 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ppp1caP62137 330 aaKnown RBP11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Hrh1P70174 488 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 UrodP70697 367 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Kcnj13P86046 360 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ripply1Q2WG77 201 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ccdc127Q3TC33 260 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Znf583Q3V080 568 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Timm8a2Q4FZG7 97 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ScinQ60604 715 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Q6DFW0 481 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 CtifQ6PEE2 600 aaKnown RBP11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Dna2Q6ZQJ5 1062 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ntf4Q80VU4 209 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tmem30bQ8BHG3 353 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cdcp2Q8BQH6 427 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Bpifb6Q8BU51 449 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 C1qtnf7Q8BVD7 289 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Galnt5Q8C102 930 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fbxl8Q8CIG9 374 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Lin7aQ8JZS0 233 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Olfr382Q8VF79 312 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Trim33Q99PP7 1142 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Acp1Q9D358 158 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Slxl1Q9D515 155 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 PaplnQ9EPX2 1280 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cts6Q9ET52 334 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cbll1Q9JIY2 491 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Upk3aQ9JKX8 287 aa11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ruvbl2Q9WTM5 463 aaKnown RBP11.09□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Igkv6-25A0A140T8N7 115 aa11.08□□□□□ -0.64
Ccdc28b-201ENSMUST00000030586 Ttll9A2APC3 461 aa11.08□□□□□ -0.64
Ccdc28b-201ENSMUST00000030586 Gpr161B2RPY5 545 aa11.08□□□□□ -0.64
Ccdc28b-201ENSMUST00000030586 Cdh19E9Q3A7 770 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms