RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SAP25Q8TEE9 199 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 EEF1AKMT1Q8WVE0 214 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 OR52A5Q9H2C5 316 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SMOC1Q9H4F8 434 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SEMA4GQ9NTN9 838 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 ZNF446Q9NWS9 450 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SENP1Q9P0U3 644 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 TAAR2Q9P1P5 351 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 YY2O15391 372 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 PCDHGA12O60330 932 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 FOXD2O60548 495 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 KLHL2O95198 593 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ANXA6P08133 673 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 CELA2BP08218 269 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 SLC35E2BP0CK96 405 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 CCDC166P0CW27 439 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 F3P13726 295 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 SLC2A4P14672 509 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ACADLP28330 430 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 EPHA8P29322 1005 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 MAPK9P45984 424 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 PREPP48147 710 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 CCT8P50990 548 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ATXN3P54252 364 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 SLC18A2Q05940 514 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 SPEM2Q0P670 501 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ZNF460Q14592 562 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 AGBL2Q5U5Z8 902 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 IYDQ6PHW0 289 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 OGFOD3Q6PK18 319 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 SLC30A9Q6PML9 568 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 DBX2Q6ZNG2 339 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 KANSL1Q7Z3B3 1105 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 TBC1D1Q86TI0 1168 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 LCA5Q86VQ0 697 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 VRK3Q8IV63 474 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 FAM46DQ8NEK8 389 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ANKRD49Q8WVL7 239 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 GTPBP2Q9BX10 602 aaKnown RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 DERL2Q9GZP9 239 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 VPS11Q9H270 941 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 CENPHQ9H3R5 247 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 OSGEPL1Q9H4B0 414 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 CAAP1Q9H8G2 361 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 PRDM8Q9NQV8 689 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 DNAAF2Q9NVR5 837 aaKnown RBP12.05□□□□□ -0.48
LINC00339-213ENST00000642137 UCKL1Q9NWZ5 548 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 FAM8A1Q9UBU6 413 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 TBC1D29Q9UFV1 150 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 DCDC2Q9UHG0 476 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 PCDHGB2Q9Y5G2 931 aa12.05□□□□□ -0.48
LINC00339-213ENST00000642137 ARHGEF17Q96PE2 2063 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 CACNA1HO95180 2353 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 CCDC189A1A4V9 331 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 A6NCN8 305 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 PDZK1P1A8MUH7 402 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 IFRD1O00458 451 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 SNX2O60749 519 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 SDC3O75056 442 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 MATN4O95460 622 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 TSPAN12O95859 305 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 GSTA1P08263 222 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 PYGBP11216 843 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 XRCC1P18887 633 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 TGM1P22735 817 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 RPL10P27635 214 aaKnown RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 HALP42357 657 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 ATP6V0D1P61421 351 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 ABRQ12979 859 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 CLCA4Q14CN2 919 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 SUZ12Q15022 739 aaKnown RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 TCEAL6Q6IPX3 200 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 PDZD3Q86UT5 571 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 MYO1HQ8N1T3 1032 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 MINDY1Q8N5J2 469 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 TFGQ92734 400 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 TCEAL3Q969E4 200 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 ALKBH8Q96BT7 664 aaKnown RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 LINGO1Q96FE5 620 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 FOPNLQ96NB1 174 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 SH3GL2Q99962 352 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 DUSP23Q9BVJ7 150 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 WWP1Q9H0M0 922 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 PSMD13Q9UNM6 376 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 RUVBL2Q9Y230 463 aaKnown RBP12.04□□□□□ -0.48
LINC00339-213ENST00000642137 WDR37Q9Y2I8 494 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
LINC00339-213ENST00000642137 KIR2DS5A0A0G2JLQ3 304 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 A0A0G2JNG1 304 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 LNP1A1A4G5 178 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms