RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 SLC25A37Q9NYZ2 338 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 TMEM9Q9P0T7 183 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 DOLKQ9UPQ8 538 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-233ENST00000642021 FFAR3O14843 346 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 AXIN1O15169 862 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 GPR42O15529 346 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 ABCB7O75027 752 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 CD160O95971 181 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 KLKB1P03952 638 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 ZDHHC11BP0C7U3 371 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 AGXTP21549 392 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 HSPA7P48741 367 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 PLA2G16P53816 162 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
PHGDH-233ENST00000642021 HMGCS1Q01581 520 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 TRAF3Q13114 568 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 BFSP2Q13515 415 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 MOGQ16653 247 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 DPY19L1Q2PZI1 675 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 DCDC5Q6ZRR9 648 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 TMEM179BQ7Z7N9 219 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 SAPCD2Q86UD0 394 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 DENND1CQ8IV53 801 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 PDZD8Q8NEN9 1154 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 PPP1R14BQ96C90 147 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 P2RY12Q9H244 342 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 COMMD8Q9NX08 183 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 ADGRE2Q9UHX3 823 aa13.6□□□□□ -0.23
PHGDH-233ENST00000642021 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 TMEM189-UBE2V1I3L0A0 370 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 TAPBPO15533 448 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CST1P01037 141 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CD9P21926 228 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHGDH-233ENST00000642021 FAM174BQ3ZCQ3 159 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 C10orf111Q8N326 155 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 KRTCAP2Q8N6L1 136 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CHDHQ8NE62 594 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF548Q8NEK5 533 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-233ENST00000642021 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 SLC6A13Q9NSD5 602 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 EXD2Q9NVH0 621 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 GBF1Q92538 1859 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 DYTNA2CJ06 578 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 JAK1P23458 1154 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CA8P35219 290 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CCR3P51677 355 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 CDH4P55283 916 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 PPP2R2BQ00005 443 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 GALNT18Q6P9A2 607 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 FRA10AC1Q70Z53 315 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 C16orf59Q7L2K0 433 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 NECAB2Q7Z6G3 386 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 MILR1Q7Z6M3 343 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 PHACTR4Q8IZ21 702 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 C8orf59Q8N0T1 100 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-233ENST00000642021 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 OR10Q1Q8NGQ4 319 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 SLC13A3Q8WWT9 602 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 GORASP2Q9H8Y8 452 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 TMEM45AQ9NWC5 275 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 NUDT4Q9NZJ9 180 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 VPS9D1Q9Y2B5 631 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 DHRS7Q9Y394 339 aa13.59□□□□□ -0.23
PHGDH-233ENST00000642021 FFAR2O15552 330 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 PRKD3O94806 890 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 ESR1P03372 595 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 FUCA1P04066 466 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 PTGER3P43115 390 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 CD47Q08722 323 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 KCNAB2Q13303 367 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 AQP6Q13520 282 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 SPANXN4Q5MJ08 99 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 C6orf141Q5SZD1 244 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 CST9Q5W186 159 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 ABI1Q8IZP0 508 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 LKAAEAR1Q8TD35 194 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 FRS2Q8WU20 508 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 FKBP10Q96AY3 582 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 COX4I2Q96KJ9 171 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 ARHGAP39Q9C0H5 1083 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 ZFP14Q9HCL3 533 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 PSME2Q9UL46 239 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 VWA8A3KMH1 1905 aa13.58□□□□□ -0.24
PHGDH-233ENST00000642021 C1orf232A0A0U1RR37 186 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms