RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IMP3Q9NV31 184 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 NSMCE4AQ9NXX6 385 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 NCKIPSDQ9NZQ3 722 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CPNE7Q9UBL6 633 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 RHPN2P1A8MT19 583 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 RIPK2O43353 540 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 NUDT21O43809 227 aaKnown RBP12.9□□□□□ -0.34
GTF3A-209ENST00000640289 RFPL3O75679 317 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 VIPP01282 170 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 APOA4P06727 396 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 GLB1P16278 677 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 FASLGP48023 281 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 RPA4Q13156 261 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 BIRC2Q13490 618 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 TMED2Q15363 201 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 PPM1JQ5JR12 505 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 WDR93Q6P2C0 686 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 TRMT10CQ7L0Y3 403 aaKnown RBP12.9□□□□□ -0.34
GTF3A-209ENST00000640289 PDZD3Q86UT5 571 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 PIM3Q86V86 326 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 TRIM48Q8IWZ4 208 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 ZBTB2Q8N680 514 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 Q8N9G6 341 aaPredicted RBP12.9□□□□□ -0.34
GTF3A-209ENST00000640289 PHC3Q8NDX5 983 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 CD200R1Q8TD46 325 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 ASZ1Q8WWH4 475 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 VPS39Q96JC1 886 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 ELMO2Q96JJ3 720 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 OLFM1Q99784 485 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 CPNE1Q99829 537 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 CCDC3Q9BQI4 270 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 FUT8Q9BYC5 575 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 EPB41L4BQ9H329 900 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 LATS2Q9NRM7 1088 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 EVA1BQ9NVM1 165 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 MTO1Q9Y2Z2 717 aaKnown RBP12.9□□□□□ -0.34
GTF3A-209ENST00000640289 COMMD10Q9Y6G5 202 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 ZNF292O60281 2723 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
GTF3A-209ENST00000640289 FAM95CA0A1B0GW59 222 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 IFRD1O00458 451 aaPredicted RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 KPNA5O15131 536 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 VPS26AO75436 327 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 MTHFD1P11586 935 aaKnown RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 SAT1P21673 171 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 FDXRP22570 491 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 ACADLP28330 430 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 GP5P40197 560 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 CLDN6P56747 220 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 OR1D5P58170 312 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 PLOD1Q02809 727 aaPredicted RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 ABRQ12979 859 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 GBX1Q14549 363 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 PLEKHS1Q5SXH7 462 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 FAM45BPQ6NSW5 357 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 FAM45AQ8TCE6 357 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 JPH3Q8WXH2 748 aaPredicted RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 NAT6Q93015 286 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 CYTH2Q99418 400 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 RBBP8Q99708 897 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 RHOJQ9H4E5 214 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 STN1Q9H668 368 aaKnown RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 POT1Q9NUX5 634 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 TXNDC16Q9P2K2 825 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
GTF3A-209ENST00000640289 DHRS7Q9Y394 339 aa12.89□□□□□ -0.35
GTF3A-209ENST00000640289 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 B4GAT1O43505 415 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 DKK1O94907 266 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SLCO2B1O94956 709 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 GP1BAP07359 652 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 MCM3P25205 808 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 CCL7P80098 99 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 NAB1Q13506 487 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 GPR18Q14330 331 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 ZNF460Q14592 562 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 NR1D2Q14995 579 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 UAP1Q16222 522 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 TMEM26Q6ZUK4 368 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 ZNF438Q7Z4V0 828 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SPRED1Q7Z699 444 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 CPNE9Q8IYJ1 553 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 OR5AR1Q8NGP9 310 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 TFGQ92734 400 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 INPP5DQ92835 1189 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms