RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MRPL39Q9NYK5 338 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 MIS18AQ9NYP9 233 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GPRC5DQ9NZD1 345 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PTGFRNQ9P2B2 879 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KLHL8Q9P2G9 620 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 PSMC3IPQ9P2W1 217 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ERVK-18Q9QC07 812 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SERGEFQ9UGK8 458 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CHRNA9Q9UGM1 479 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SLC24A2Q9UI40 661 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CA14Q9ULX7 337 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NENFQ9UMX5 172 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PACSIN2Q9UNF0 486 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 SHOC2Q9UQ13 582 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZNF148Q9UQR1 794 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RUVBL2Q9Y230 463 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ZBTB1Q9Y2K1 713 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NFE2L3Q9Y4A8 694 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MFHAS1Q9Y4C4 1052 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CACNG2Q9Y698 323 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 BZW2Q9Y6E2 419 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 MAU2Q9Y6X3 613 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 INSRP06213 1382 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 UBE4BO95155 1302 aa2.96□□□□□ -1.93
VIM-210ENST00000637053 ZBED9Q6R2W3 1325 aa2.96□□□□□ -1.93
VIM-210ENST00000637053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 A0A0J9YYE9 177 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MACROD2A1Z1Q3 448 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SNTNA6NMZ2 147 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KRTAP29-1A8MX34 341 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 KBTBD13C9JR72 458 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PYCARD-AS1I3L0S3 204 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 BTN3A1O00481 513 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 HGSO14964 777 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 DCLK1O15075 740 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KMOO15229 486 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CYP27B1O15528 508 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ST8SIA3O43173 380 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PAPSS1O43252 624 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 GATCO43716 136 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 LANCL1O43813 399 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NDUFS6O75380 124 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 GPR32O75388 356 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 WBP4O75554 376 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 SERPINI2O75830 405 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 DNAJB5O75953 348 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SLC16A8O95907 504 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 GAS8O95995 478 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TRBC1P01850 177 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 APOEP02649 317 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 LCATP04180 440 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 AMY2AP04746 511 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CHRM2P08172 466 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KRT19P08727 400 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 LINGO3P0C6S8 592 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MLNP12872 115 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 RPA2P15927 270 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 VCLP18206 1134 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ITGB6P18564 788 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ADRA2CP18825 462 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 AMY2BP19961 511 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 POU1F1P28069 291 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 HOXA9P31269 272 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 RYKP34925 604 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ARL1P40616 181 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 CRATP43155 626 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SLC6A11P48066 632 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SLC1A6P48664 564 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SLC9A3P48764 834 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CASP4P49662 377 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FHITP49789 147 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CDK7P50613 346 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CDH6P55285 790 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 WNT3P56703 355 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TIRAPP58753 221 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 GRIN1Q05586 938 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SLFN5Q08AF3 891 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PPIGQ13427 754 aaKnown RBP eCLIP2.96□□□□□ -1.94
VIM-210ENST00000637053 DGCR6Q14129 220 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SF3B4Q15427 424 aaKnown RBP eCLIP2.96□□□□□ -1.94
VIM-210ENST00000637053 PDK4Q16654 411 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SKIDA1Q1XH10 827 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 DPY19L1Q2PZI1 675 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ASTE1Q2TB18 679 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 CR1LQ2VPA4 569 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MOGAT2Q3SYC2 334 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KHDC1Q4VXA5 237 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 BEX5Q5H9J7 111 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ZMAT1Q5H9K5 638 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ZNF766Q5HY98 468 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 AARS2Q5JTZ9 985 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 SPANXN2Q5MJ10 180 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MANEAQ5SRI9 462 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 WLSQ5T9L3 541 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FAM91A1Q658Y4 838 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KRT40Q6A162 431 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SIGIRRQ6IA17 410 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NAPEPLDQ6IQ20 393 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ZNF425Q6IV72 752 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms