RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 E7EVH7 732 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 QSOX1O00391 747 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 DDX3YO15523 660 aaKnown RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 ZBTB11O95625 1053 aaPredicted RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 AP2A1O95782 977 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 GSTM1P09488 218 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 EBLN1P0CF75 366 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 FOLR1P15328 257 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 ITGB6P18564 788 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 CDH3P22223 829 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 GSTM4Q03013 218 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 KCNC4Q03721 635 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 CACNG1Q06432 222 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 LAMB3Q13751 1172 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 KCNAB1Q14722 419 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 SKIDA1Q1XH10 827 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 KCTD11Q693B1 232 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 CARFQ8N187 725 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 RNF10Q8N5U6 811 aaKnown RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 C9orf43Q8TAL5 461 aaPredicted RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 LCN9Q8WX39 176 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 FERD3LQ96RJ6 166 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 CLMPQ9H6B4 373 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 COG4Q9H9E3 785 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 FGF21Q9NSA1 209 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 SEMA5BQ9P283 1151 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
PNKP-225ENST00000636214 MYO18BQ8IUG5 2567 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 ERI2A8K979 691 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 F8W8V4 182 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 H7C0S8 307 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 KRT86O43790 486 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 CPNE3O75131 537 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 METTL18O95568 372 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 IFNB1P01574 187 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 POLR2CP19387 275 aaPredicted RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 OAS2P29728 719 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 STIP1P31948 543 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 FDFT1P37268 417 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 TUBB4BP68371 445 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 MSLNQ13421 630 aaPredicted RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 TUBB2AQ13885 445 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 CAPRIN2Q6IMN6 1127 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 PPP1R21Q6ZMI0 780 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 HOOK3Q86VS8 718 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 TMEM126BQ8IUX1 230 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 TMEM139Q8IV31 216 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 KLHDC8BQ8IXV7 354 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 OR4E2Q8NGC2 313 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 SLC35B2Q8TB61 432 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 UBE2Q2Q8WVN8 375 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 HES6Q96HZ4 224 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 TTC1Q99614 292 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 TUBB2BQ9BVA1 445 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 FRMD8P1Q9BZ68 369 aaPredicted RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 TRIM4Q9C037 500 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 LHX9Q9NQ69 397 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 PIH1D1Q9NWS0 290 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 SMARCAL1Q9NZC9 954 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 POLHQ9Y253 713 aa17.46■□□□□ 0.39
PNKP-225ENST00000636214 R3HDM2Q9Y2K5 976 aaKnown RBP17.46■□□□□ 0.39
PNKP-225ENST00000636214 PIPSLA2A3N6 862 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 CCDC78A2IDD5 438 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 CDC14CA4D256 554 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 C21orf140B9A014 251 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 PYCARD-AS1I3L0S3 204 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 AP2A2O94973 939 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 WISP1O95388 367 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 MSNP26038 577 aaKnown RBP17.45■□□□□ 0.38
PNKP-225ENST00000636214 ARCN1P48444 511 aaKnown RBP17.45■□□□□ 0.38
PNKP-225ENST00000636214 GDF10P55107 478 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 CDH17Q12864 832 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 RPA4Q13156 261 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 DNASE1L3Q13609 305 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 ERV3-1Q14264 604 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 SYTL3Q4VX76 610 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 PWWP2BQ6NUJ5 590 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 GAS2L3Q86XJ1 694 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 D2HGDHQ8N465 521 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 LILRA3Q8N6C8 439 aaPredicted RBP17.45■□□□□ 0.38
PNKP-225ENST00000636214 SEC14L1Q92503 715 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 CDKN2AIPNLQ96HQ2 116 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 TWSG1Q9GZX9 223 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 MVB12BQ9H7P6 319 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 GUCA1BQ9UMX6 200 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 ZNF148Q9UQR1 794 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 CAPN6Q9Y6Q1 641 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 TENM4Q6N022 2769 aa17.45■□□□□ 0.38
PNKP-225ENST00000636214 TRBV5-4A0A0C4DH59 114 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 SUV39H1O43463 412 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 SGTAO43765 313 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 SCRG1O75711 98 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 FTH1P02794 183 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 NTRK1P04629 796 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 NSG1P42857 185 aa17.44■□□□□ 0.38
PNKP-225ENST00000636214 CD151P48509 253 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms