RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PELI3Q8N2H9 469 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CELF5Q8N6W0 485 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FAM136AQ96C01 138 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 EID2BQ96D98 161 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 C19orf60Q96EN9 201 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MOGAT1Q96PD6 335 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PANX3Q96QZ0 392 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MCCC1Q96RQ3 725 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 OSBPL1AQ9BXW6 950 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ZDHHC6Q9H6R6 413 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 IL26Q9NPH9 171 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 STX18Q9P2W9 335 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SLC7A8Q9UHI5 535 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 C15orf41Q9Y2V0 281 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PTPRSQ13332 1948 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 A0A1B0GVC2 190 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 LRRC72A6NJI9 287 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 MEI4A8MW99 385 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PSMD12O00232 456 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CDC7O00311 574 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 UBFD1O14562 309 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 AIM2O14862 343 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 RAD51BO15315 384 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 GPR39O43194 453 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PRAMEF12O95522 483 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 TSPAN12O95859 305 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CYP17A1P05093 508 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 RPS17P08708 135 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CBSLP0DN79 551 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 EPCAMP16422 314 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF30P17039 623 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CBSP35520 551 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NSG1P42857 185 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 STK19P49842 368 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NUDT2P50583 147 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PKNOX1P55347 436 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SH3BP2P78314 561 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ARHGEF7Q14155 803 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 RCN1Q15293 331 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CHRNA6Q15825 494 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 LY6G5CQ5SRR4 150 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 KANK2Q63ZY3 851 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 METTL2BQ6P1Q9 378 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 RIPOR1Q6ZS17 1223 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 DSELQ8IZU8 1212 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NXPE1Q8N323 547 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PPFIBP2Q8ND30 876 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF540Q8NDQ6 660 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 IL17RDQ8NFM7 739 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 GOT1L1Q8NHS2 421 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 HCAR2Q8TDS4 363 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 TRPC4APQ8TEL6 797 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF483Q8TF39 744 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 WDR60Q8WVS4 1066 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 C17orf50Q8WW18 174 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ASB12Q8WXK4 309 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NACC2Q96BF6 587 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PLEKHG4BQ96PX9 1271 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 HEPHQ9BQS7 1158 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 C17orf80Q9BSJ5 609 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PIDD1Q9HB75 910 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SPATS2LQ9NUQ6 558 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ZDHHC3Q9NYG2 299 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PKD2L2Q9NZM6 624 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 THEGQ9P2T0 379 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NKX1-2Q9UD57 310 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CDH22Q9UJ99 828 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ERVW-1Q9UQF0 538 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 EIF3FO00303 357 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 BNIP3LO60238 219 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SIX3O95343 332 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ESRRBO95718 433 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PAHP00439 452 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 JUNP05412 331 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SRPRAP08240 638 aaKnown RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 UROSP10746 265 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 GKP32189 559 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 VHLP40337 213 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 ACADVLP49748 655 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 LIMK1P53667 647 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CDH13P55290 713 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PTPRRQ15256 657 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 RBBP7Q16576 425 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 UGT3A2Q3SY77 523 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 TMEM198Q66K66 360 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 TTC23LQ6PF05 361 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 DPY19L3Q6ZPD9 716 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 SPATA19Q7Z5L4 167 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 GRASPQ7Z6J2 395 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 MYLK4Q86YV6 388 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 CPNE9Q8IYJ1 553 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 PGAM4Q8N0Y7 254 aa7.04□□□□□ -1.28
BRCA1-230ENST00000634433 DRAXINQ8NBI3 349 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-230ENST00000634433 DTX3LQ8TDB6 740 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms