RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PAGE3Q5JUK9 113 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 SWT1Q5T5J6 900 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 NCEH1Q6PIU2 408 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CRTC1Q6UUV9 634 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 BNIPLQ7Z465 357 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 ADAMTSL2Q86TH1 951 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 SYT12Q8IV01 421 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 RAVER1Q8IY67 606 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 ACTRT2Q8TDY3 377 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 SUSD6Q92537 303 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 IRF7Q92985 503 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 FAR2Q96K12 515 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CCDC138Q96M89 665 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 FOPNLQ96NB1 174 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 KXD1Q9BQD3 176 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 STN1Q9H668 368 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 FZD3Q9NPG1 666 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 IMP3Q9NV31 184 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 IL17CQ9P0M4 197 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 DEC1Q9P2X7 70 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 DNMT3BQ9UBC3 853 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 STK39Q9UEW8 545 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 NCOR1O75376 2440 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 TMEM189-UBE2V1I3L0A0 370 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 TRIM38O00635 465 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 TSPAN6O43657 245 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 KERAO60938 352 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 XYLBO75191 536 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 TGFB1P01137 390 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 HK3P52790 923 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 IRX1P78414 480 aaPredicted RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 FPGSQ05932 587 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 RAB33AQ14088 237 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 INPP5AQ14642 412 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 PCBP2Q15366 365 aaKnown RBP eCLIP7.38□□□□□ -1.238e-7■■■■□ 22.2
PKP4-217ENST00000628904 CACHD1Q5VU97 1274 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 SPESP1Q6UW49 350 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CCDC81Q6ZN84 652 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CYS1Q717R9 158 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 VRK3Q8IV63 474 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 PGAM4Q8N0Y7 254 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CPSF7Q8N684 471 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 FAM47BQ8NA70 645 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 DCAF4L2Q8NA75 395 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 KIAA1191Q96A73 305 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 NSMCE2Q96MF7 247 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 MACROD1Q9BQ69 325 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 LIN28AQ9H9Z2 209 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 IRAK4Q9NWZ3 460 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
PKP4-217ENST00000628904 PCDHGB4Q9UN71 923 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 PCDHGB5Q9Y5G0 923 aa7.38□□□□□ -1.23
PKP4-217ENST00000628904 ZNF195O14628 629 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 F11P03951 625 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 ALPPL2P10696 532 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 SPTBP11277 2137 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 ACADSP16219 412 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 CEBPBP17676 345 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 FDXRP22570 491 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 ATP6V0D1P61421 351 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 CARD16Q5EG05 197 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 GDPD4Q6W3E5 623 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 SATL1Q86VE3 508 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 RIN3Q8TB24 985 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 FAM120BQ96EK7 910 aaKnown RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 HAUS8Q9BT25 410 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 ARIH1Q9Y4X5 557 aaPredicted RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 FAM186AA6NE01 2351 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 KNTC1P50748 2209 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 DHRS12A0PJE2 317 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 MGAT4DA6NG13 374 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 MROH6A6NGR9 719 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 NPHS1O60500 1241 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 POP4O95707 220 aaKnown RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 ESR1P03372 595 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 OPN1SWP03999 348 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 LYNP07948 512 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 MTHFD2P13995 350 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 POU1F1P28069 291 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 PDHA2P29803 388 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 HMGCLP35914 325 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 ZNF140P52738 457 aaPredicted RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 TRIM25Q14258 630 aaKnown RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 CCSMST1Q4G0I0 132 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 ASTLQ6HA08 431 aaPredicted RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 ADNP2Q6IQ32 1131 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 TTC23LQ6PF05 361 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 TTC33Q6PID6 262 aaPredicted RBP7.37□□□□□ -1.23
PKP4-217ENST00000628904 SNX20Q7Z614 316 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 OR5AK3PQ8NH89 298 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 MIEF2Q96C03 454 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 PLEKHG4BQ96PX9 1271 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 SLC6A17Q9H1V8 727 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 TUBB1Q9H4B7 451 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 CTPS2Q9NRF8 586 aa7.37□□□□□ -1.23
PKP4-217ENST00000628904 LHX3Q9UBR4 397 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms