RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 RMI1Q9H9A7 625 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PARVBQ9HBI1 364 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 DNAJC28Q9NX36 388 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 ATXN10Q9UBB4 475 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 DCTN4Q9UJW0 460 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 IKZF3Q9UKT9 509 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 STK38LQ9Y2H1 464 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 PCDHGA10Q9Y5H3 936 aa7.4□□□□□ -1.22
PTP4A1-206ENST00000627002 TCF20Q9UGU0 1960 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 PLXNA2O75051 1894 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ATXN2Q99700 1313 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 A0A0G2JND7 137 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 SLC5A10A0PJK1 596 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MGAT4DA6NG13 374 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 NCF1BA6NI72 391 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CCT8L1PA6NM43 557 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 FAM170BA6NMN3 283 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 NCF1CA8MVU1 366 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 H3BM21 787 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 GFYI3L273 518 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CACNB4O00305 520 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TOR1BO14657 336 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CHUKO15111 745 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 KMOO15229 486 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HDAC3O15379 428 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 LILRB5O75023 590 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ZNF217O75362 1048 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 POP7O75817 140 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MATN4O95460 622 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MLYCDO95822 493 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 RPS17P08708 135 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ANXA5P08758 320 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HIST1H2AGP0C0S8 130 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 NCF1P14598 390 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HIST1H2ADP20671 130 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ARRB2P32121 409 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 NUDT1P36639 197 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HNMTP50135 292 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 RPL14P50914 215 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CCR5P51681 352 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HK3P52790 923 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 AQP5P55064 265 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 AP1S2P56377 157 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 SF3A3Q12874 501 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 IFT88Q13099 833 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 RPA4Q13156 261 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 PCBP2Q15366 365 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ZNF658BQ4V348 819 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 UNC50Q53HI1 259 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 SBSNQ6UWP8 590 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 C6orf89Q6UWU4 347 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CCDC121Q6ZUS5 278 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 UBE2R2Q712K3 238 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TRPM8Q7Z2W7 1104 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 YTHDF3Q7Z739 585 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TRIM74Q86UV6 250 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 SLC22A15Q8IZD6 547 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 LSMEM2Q8N112 164 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 SIX5Q8N196 739 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 BEND7Q8N7W2 519 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 ZNF781Q8N8C0 355 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 FLCNQ8NFG4 579 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TSTD1Q8NFU3 115 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 OR2L2Q8NH16 312 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MCOLN3Q8TDD5 553 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 UBTD2Q8WUN7 234 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HIST1H2AHQ96KK5 128 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 HIST1H2AJQ99878 128 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 EGFL8Q99944 293 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 H2AFJQ9BTM1 129 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TMEM120AQ9BXJ8 343 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 COG4Q9H9E3 785 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 KCNK13Q9HB14 408 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MBNL1Q9NR56 388 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 PNPOQ9NVS9 261 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MARCOQ9UEW3 520 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 MBD1Q9UIS9 605 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TSR3Q9UJK0 312 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 PTBP2Q9UKA9 531 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 CDYLQ9Y232 598 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 APOBEC2Q9Y235 224 aaKnown RBP7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 XIRP2A4UGR9 3374 aa7.39□□□□□ -1.23
PTP4A1-206ENST00000627002 TRPC5OSA6NMA1 111 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 MATN2O00339 956 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 FPGTO14772 594 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 GIPC1O14908 333 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 GRID2O43424 1007 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 LATO43561 262 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 DCXO43602 365 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 KCNJ13O60928 360 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 PSIP1O75475 530 aaKnown RBP7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 SIX3O95343 332 aaPredicted RBP7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 SEMA4FO95754 770 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 GUCA1CO95843 209 aa7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 CATP04040 527 aaKnown RBP7.38□□□□□ -1.23
PTP4A1-206ENST00000627002 CHRNGP07510 517 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms