RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 HMGCS1Q01581 520 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 KIAA0040Q15053 153 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 NKG7Q16617 165 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 ATXN7L2Q5T6C5 722 aaPredicted RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 OR2T12Q8NG77 320 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 LKAAEAR1Q8TD35 194 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 SLC13A3Q8WWT9 602 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 CASD1Q96PB1 797 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 APOL5Q9BWW9 433 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 LMCD1Q9NZU5 365 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 UTS2RQ9UKP6 389 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 FCF1Q9Y324 198 aaKnown RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 CCL27Q9Y4X3 112 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 RAD51BO15315 384 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 MZF1P28698 734 aaPredicted RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 GGT5P36269 586 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 LAPTM5Q13571 262 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 FAM174BQ3ZCQ3 159 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 DUS1LQ6P1R4 473 aaKnown RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 XKR5Q6UX68 686 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 DNAJC14Q6Y2X3 702 aaPredicted RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 HS3ST5Q8IZT8 346 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 CLDN19Q8N6F1 224 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 OR8J3Q8NGG0 315 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 SNRNP27Q8WVK2 155 aaKnown RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 EGFL8Q99944 293 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 TOR3AQ9H497 397 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 IKZF5Q9H5V7 419 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 RETREG1Q9H6L5 497 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 SMURF2Q9HAU4 748 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 ZFP14Q9HCL3 533 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 SMPD4Q9NXE4 827 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.07□□□□□ -0.64
VARS2-213ENST00000625423 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 ZNHIT2Q9UHR6 403 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 ADGRE2Q9UHX3 823 aa11.07□□□□□ -0.64
VARS2-213ENST00000625423 FRMPD3Q5JV73 1810 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
VARS2-213ENST00000625423 CPNE6O95741 557 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 BNIP3Q12983 259 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 ADGRF1Q5T601 910 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 SULT1C3Q6IMI6 304 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 CHST9Q7L1S5 443 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 ZBTB46Q86UZ6 589 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 SERPINA9Q86WD7 417 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 ZDHHC13Q8IUH4 622 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 TBC1D15Q8TC07 691 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 SGCDQ92629 289 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 GTF2H4Q92759 462 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PPP3R2Q96LZ3 170 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PAIP1Q9H074 479 aaKnown RBP11.06□□□□□ -0.64
VARS2-213ENST00000625423 CLPBQ9H078 707 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 DNAAF2Q9NVR5 837 aaKnown RBP11.06□□□□□ -0.64
VARS2-213ENST00000625423 LHX3Q9UBR4 397 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 ANGPTL3Q9Y5C1 460 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PCDHB7Q9Y5E2 793 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 G3V2T6 193 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 H0Y626 953 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 NOBOXO60393 691 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 TRIM16O95361 564 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 IL7RP16871 459 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 RHOAP61586 193 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 HTRA3P83110 453 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PPP1R8Q12972 351 aaKnown RBP11.06□□□□□ -0.64
VARS2-213ENST00000625423 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 CARNMT1Q8N4J0 409 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 KRTCAP2Q8N6L1 136 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 TERB1Q8NA31 727 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 OR13F1Q8NGS4 319 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 OR6K2Q8NGY2 324 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
VARS2-213ENST00000625423 PLD4Q96BZ4 506 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 ZBTB18Q99592 522 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 TTPALQ9BTX7 342 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 UGT2B28Q9BY64 529 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 RNF38Q9H0F5 515 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 KLQ9UEF7 1012 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
VARS2-213ENST00000625423 H7C4K7 107 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 PRAMEF1O95521 474 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CST1P01037 141 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 TFPTP0C1Z6 253 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 MBL2P11226 248 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 HMGCLP35914 325 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CAP1Q01518 475 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CYP4F3Q08477 520 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 MAPKAPK3Q16644 382 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 PHKG1Q16816 387 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms