RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PTRHD1Q6GMV3 140 aaKnown RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZNF773Q6PK81 442 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 LINGO4Q6UY18 593 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 MACC1Q6ZN28 852 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 NECAB2Q7Z6G3 386 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 SERPINA9Q86WD7 417 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 TMEM173Q86WV6 379 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RNF168Q8IYW5 571 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 DCAF4L2Q8NA75 395 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 PJA1Q8NG27 643 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ITFG1Q8TB96 612 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 GTF2H4Q92759 462 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 TMBIM1Q969X1 311 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 VPS50Q96JG6 964 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 PPM1MQ96MI6 270 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RNF145Q96MT1 663 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 SEPHS2Q99611 448 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 SH3GL1Q99961 368 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 FEM1AQ9BSK4 669 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 NTMT1Q9BV86 223 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CD244Q9BZW8 370 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 IPPKQ9H8X2 491 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CXorf21Q9HAI6 301 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 DNAJB9Q9UBS3 223 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRBV5-3A0A0A0MS03 114 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TBKBP1A7MCY6 615 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 NT5C1B-RDH14C9J2C7 533 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 K7EPI3 171 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 MANBAO00462 879 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 DFNA5O60443 496 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TBL1XO60907 577 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 KATNA1O75449 491 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 GMNNO75496 209 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SEC24DO94855 1032 aaPredicted RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALPLP05186 524 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 IL6P05231 212 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 CNPP09543 421 aaKnown RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 EBLN1P0CF75 366 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 IRF1P10914 325 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC2A4P14672 509 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ITGALP20701 1170 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 AKT1P31749 480 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 OR1D2P34982 312 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAPK8P45983 427 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 HSPA7P48741 367 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ARSFP54793 590 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 CYP4F3Q08477 520 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 EPS8Q12929 822 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 PMS2P3Q13401 168 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TUBA3CQ13748 450 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 RAB39AQ14964 217 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TCTN1Q2MV58 587 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPR33Q49SQ1 333 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 PYCR3Q53H96 274 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPRC6AQ5T6X5 926 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TTC23Q5W5X9 447 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ATG9BQ674R7 924 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 TPGS2Q68CL5 300 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 CALHM3Q86XJ0 350 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 MSRB3Q8IXL7 192 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM217AQ8IXS0 508 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM126BQ8IXS8 530 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZBTB2Q8N680 514 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZNF548Q8NEK5 533 aaPredicted RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 LKAAEAR1Q8TD35 194 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC22A17Q8WUG5 538 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC13A3Q8WWT9 602 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 USP7Q93009 1102 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 AURKBQ96GD4 344 aaPredicted RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 RPL10LQ96L21 214 aaKnown RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZIC5Q96T25 663 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 C17orf80Q9BSJ5 609 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 CIPCQ9C0C6 399 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 CLMPQ9H6B4 373 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAGIXQ9H6Y5 334 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 POLR1BQ9H9Y6 1135 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 STARD7Q9NQZ5 370 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 IFT80Q9P2H3 777 aaPredicted RBP9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 OPTCQ9UBM4 332 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 EBF1Q9UH73 591 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 VPS51Q9UID3 782 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAN2B2Q9Y2E5 1009 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 PRSS21Q9Y6M0 314 aa9.44□□□□□ -0.9
IGHV3-54-201ENST00000622166 SERTM1A2A2V5 107 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 AGAP14A8MT82 685 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM220BPB1ANY3 271 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 NPIPB8E9PQR5 432 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 H0Y626 953 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 EIF3FO00303 357 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms