RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ACADLP28330 430 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 ECHS1P30084 290 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SSTR1P30872 391 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 HALP42357 657 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 ABCG1P45844 678 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 ADARP55265 1226 aaKnown RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 BIRC2Q13490 618 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 RNF187Q5TA31 235 aaPredicted RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 PTRHD1Q6GMV3 140 aaKnown RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 RBM44Q6ZP01 1051 aaKnown RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 CAPN12Q6ZSI9 719 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SDCCAG8Q86SQ7 713 aaPredicted RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 PDZD3Q86UT5 571 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SLITRK4Q8IW52 837 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 CNTN4Q8IWV2 1026 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 TRIM48Q8IWZ4 208 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 CACTIN-AS1Q8N1I8 211 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 C2CD4AQ8NCU7 369 aaPredicted RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 PHC3Q8NDX5 983 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 MNS1Q8NEH6 495 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 GIMAP7Q8NHV1 300 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 RSC1A1Q92681 617 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 ATXN7L3BQ96GX2 97 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SLC30A3Q99726 388 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 NAT9Q9BTE0 207 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 VPS37BQ9H9H4 285 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 L2HGDHQ9H9P8 463 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 UCK1Q9HA47 277 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 SMYD2Q9NRG4 433 aa10.54□□□□□ -0.72
TARDBP-223ENST00000620632 INTS10Q9NVR2 710 aaKnown RBP10.54□□□□□ -0.72
TARDBP-223ENST00000620632 C1QTNF9BB2RNN3 333 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 AGRPO00253 132 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 NDC80O14777 642 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 EIF3HO15372 352 aaKnown RBP eCLIP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 ZNF500O60304 480 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 ESR1P03372 595 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 GSTM1P09488 218 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 C1QTNF9P0C862 333 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 PKMP14618 531 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 TYRP1P17643 537 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 MPSTP25325 297 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 MAPK9P45984 424 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 CARSP49589 748 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 GPX6P59796 221 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 PPP1CAP62136 330 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 TIAL1Q01085 375 aaKnown RBP eCLIP10.53□□□□□ -0.726e-7■■□□□ 11.7
TARDBP-223ENST00000620632 GSTM4Q03013 218 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 ZFP36L1Q07352 338 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 HSPA14Q0VDF9 509 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 RPA4Q13156 261 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 GBX1Q14549 363 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 RBM20Q5T481 1227 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 LRRC6Q86X45 466 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 SLC22A15Q8IZD6 547 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 CEP112Q8N8E3 955 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 WDR48Q8TAF3 677 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 GSDMBQ8TAX9 411 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 C9orf72Q96LT7 481 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 STN1Q9H668 368 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 MOCS1Q9NZB8 636 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
TARDBP-223ENST00000620632 PSAT1Q9Y617 370 aa10.53□□□□□ -0.72
TARDBP-223ENST00000620632 DMXL2Q8TDJ6 3036 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 IGHV5-10-1A0A0J9YXX1 117 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 TRABD2BA6NFA1 517 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 SLCO2B1O94956 709 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CPNE6O95741 557 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 AHSGP02765 367 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CAPNS1P04632 268 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 TPBGLP0DKB5 382 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 THRAP10827 490 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 LEPRP48357 1165 aaKnown RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CD151P48509 253 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CLCN7P51798 805 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PGGT1BP53609 377 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 EPHA4P54764 986 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 GFERP55789 205 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 GPLD1P80108 840 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 FOXK2Q01167 660 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CAV1Q03135 178 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 SQSTM1Q13501 440 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 FRG1Q14331 258 aaKnown RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 SYTL3Q4VX76 610 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CCDC25Q86WR0 208 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 LMNTD2Q8IXW0 634 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 AVL9Q8NBF6 648 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 OR5AR1Q8NGP9 310 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 OR10G6Q8NH81 332 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CALML6Q8TD86 181 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PYROXD1Q8WU10 500 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 TFGQ92734 400 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms