RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 FDFT1P37268 417 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 CDH17Q12864 832 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 NFATC3Q12968 1075 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 MAP7Q14244 749 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 KRT33BQ14525 404 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 C6orf15Q6UXA7 325 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-203ENST00000620514 PPP1R21Q6ZMI0 780 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 PHC3Q8NDX5 983 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 OR4E2Q8NGC2 313 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 ZFPM2Q8WW38 1151 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 FERD3LQ96RJ6 166 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 FRMD8P1Q9BZ68 369 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-203ENST00000620514 SMARCAL1Q9NZC9 954 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 SLC2A6Q9UGQ3 507 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 LNPEPQ9UIQ6 1025 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 COLEC10Q9Y6Z7 277 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 HELZ2Q9BYK8 2649 aaKnown RBP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 UBA6A0AVT1 1052 aaPredicted RBP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 TLCD2A6NGC4 264 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 ERI2A8K979 691 aaKnown RBP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 SUN1O94901 812 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 POLR2CP19387 275 aaPredicted RBP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 NDUFS1P28331 727 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 LMAN1P49257 510 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 KPNA2P52292 529 aaKnown RBP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 TUBB3Q13509 450 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 SKIDA1Q1XH10 827 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMGN3-203ENST00000620514 ATP1A1-AS1Q5TC04 95 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 ARMC6Q6NXE6 501 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 PPP1R3BQ86XI6 285 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 OR13J1Q8NGT2 312 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 STARD8Q92502 1023 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 CD180Q99467 661 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 RAB6BQ9NRW1 208 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 CROTQ9UKG9 612 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 HEBP2Q9Y5Z4 205 aa16.71■□□□□ 0.27
HMGN3-203ENST00000620514 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 E7EVH7 732 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 PYCARD-AS1I3L0S3 204 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 ZIC2O95409 532 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-203ENST00000620514 OAS2P29728 719 aaKnown RBP16.7■□□□□ 0.26
HMGN3-203ENST00000620514 RPL22P35268 128 aaKnown RBP16.7■□□□□ 0.26
HMGN3-203ENST00000620514 DLSTP36957 453 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 ARL4DP49703 201 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 NFKB2Q00653 900 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 CDC20Q12834 499 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 SEMA5AQ13591 1074 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 KCTD19Q17RG1 926 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-203ENST00000620514 TSTD2Q5T7W7 516 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 PWWP2BQ6NUJ5 590 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 BORAQ6PGQ7 559 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 NAPRTQ6XQN6 538 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 D2HGDHQ8N465 521 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 ACVR1CQ8NER5 493 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 UBE2Q2Q8WVN8 375 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 HDAC10Q969S8 669 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 STAMBPL1Q96FJ0 436 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 ZNF778Q96MU6 729 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 EFHD1Q9BUP0 239 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 PDE7BQ9NP56 450 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 FGF21Q9NSA1 209 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 RARRES3Q9UL19 164 aa16.7■□□□□ 0.26
HMGN3-203ENST00000620514 HEATR9A2RTY3 570 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 IFRD1O00458 451 aaPredicted RBP16.69■□□□□ 0.26
HMGN3-203ENST00000620514 BTN3A3O00478 584 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 TERTO14746 1132 aaKnown RBP16.69■□□□□ 0.26
HMGN3-203ENST00000620514 OR1I1O60431 355 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 AP2A2O94973 939 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 GOT2P00505 430 aaKnown RBP16.69■□□□□ 0.26
HMGN3-203ENST00000620514 CCDC175P0C221 793 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 HSD11B2P80365 405 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 ACY1Q03154 408 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 ITIH4Q14624 930 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 BRD3Q15059 726 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 GPR19Q15760 415 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 C16orf46Q6P387 395 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 ZNF662Q6ZS27 426 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 KMT5CQ86Y97 462 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 LCN9Q8WX39 176 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 HGH1Q9BTY7 390 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 SRMSQ9H3Y6 488 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 XKR8Q9H6D3 395 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 STARD5Q9NSY2 213 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
HMGN3-203ENST00000620514 PAK5Q9P286 719 aa16.69■□□□□ 0.26
HMGN3-203ENST00000620514 PIKFYVEQ9Y2I7 2098 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 BTN3A1O00481 513 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 ZBTB11O95625 1053 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-203ENST00000620514 GAS8O95995 478 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 NTRK1P04629 796 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 APRTP07741 180 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 TCN2P20062 427 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 ADRA1DP25100 572 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 NSG1P42857 185 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms