RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MIPEPQ99797 713 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ANGPT4Q9Y264 503 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 KCNE2Q9Y6J6 123 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NUMA1Q14980 2115 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 KCNU1A8MYU2 1149 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GPR89AB7ZAQ6 455 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GPR89BP0CG08 455 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 IL4RP24394 825 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 EIF2B2P49770 351 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 ATF6BQ99941 703 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TM6SF2Q9BZW4 377 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SCN5AQ14524 2016 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GLYATL1P3A0A0U1RQE8 302 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 WNT9AO14904 365 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 DSCR3O14972 297 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ATXN7O15265 892 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 SERPINA3P01011 423 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OPN1SWP03999 348 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FGFR4P22455 802 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GDF1P27539 372 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GPC5P78333 572 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 EXT1Q16394 746 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ARMC4Q5T2S8 1044 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NUDT13Q86X67 352 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FAM162AQ96A26 154 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TBL1YQ9BQ87 522 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PIH1D1Q9NWS0 290 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 MS4A12Q9NXJ0 267 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CYP2D7A0A087X1C5 515 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SH3PXD2BA1X283 911 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RCCD1A6NED2 376 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SKILP12757 684 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MECP2P51608 486 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 ARFIP1P53367 373 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CLNS1AP54105 237 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 MYL6P60660 151 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF783Q6ZMS7 281 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MACC1Q6ZN28 852 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CMTM8Q8IZV2 173 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PBKQ96KB5 322 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF583Q96ND8 569 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 EPYCQ99645 322 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SH3GL1Q99961 368 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RGS17Q9UGC6 210 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 CHORDC1Q9UHD1 332 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 SH3GLB1Q9Y371 365 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 A0A087WUV0 522 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 SOX30O94993 753 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CYP4B1P13584 511 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ATP1A3P13637 1013 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 COL9A3Q14050 684 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 SYT16Q17RD7 645 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TYW1BQ6NUM6 668 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FITM2Q8N6M3 262 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PSKH2Q96QS6 385 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PBX4Q9BYU1 374 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PRODH2Q9UF12 536 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MAGEB16A2A368 324 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RASAL1O95294 804 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ITGB5P18084 799 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 KIR3DL1P43629 444 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 GNG11P61952 73 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TUBB3Q13509 450 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TRA2AQ13595 282 aaKnown RBP eCLIP3.3□□□□□ -1.88
LPP-220ENST00000617246 GBX1Q14549 363 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SPDYCQ5MJ68 293 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CAPN12Q6ZSI9 719 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 AMZ2Q86W34 360 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MMAAQ8IVH4 418 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 OR56A4Q8NGH8 313 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 QKIQ96PU8 341 aaKnown RBP eCLIP3.3□□□□□ -1.887e-7■■■■□ 22.8
LPP-220ENST00000617246 CD180Q99467 661 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 FPR2P25090 351 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SERPINB4P48594 390 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ATXN1P54253 815 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 EIF3EP60228 445 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF33BQ06732 778 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SNAPC1Q16533 368 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GPAT3Q53EU6 434 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RAET1LQ5VY80 246 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PRSS55Q6UWB4 352 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 BEND5Q7L4P6 421 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RAB11FIP2Q7L804 512 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ADGRG6Q86SQ4 1221 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NLGN4XQ8N0W4 816 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ARL10Q8N8L6 244 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF610Q8N9Z0 462 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NLGN4YQ8NFZ3 816 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 UBA3Q8TBC4 463 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MMABQ96EY8 250 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 POC1B-GALNT4F8VUJ3 575 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MEFVO15553 781 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 RAPSNQ13702 412 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PDPK2PQ6A1A2 396 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms