RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 EDIL3O43854 480 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 UNC5CO95185 931 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 DNAJB1P25685 340 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 NCF4Q15080 339 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 EML3Q32P44 896 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 PRAMEF14Q5SWL7 426 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 PRAMEF13Q5VWM6 474 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 LRRC70Q7Z2Q7 622 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 BHLHE22Q8NFJ8 381 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 ZCCHC10Q8TBK6 192 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC2A6Q9UGQ3 507 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 PRPF19Q9UMS4 504 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 GTF2A1LQ9UNN4 478 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 KERAO60938 352 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC25A12O75746 678 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 S100A5P33763 92 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 POLR2JP52435 117 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 C1DQ13901 141 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 KPNB1Q14974 876 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 Q6ZVL8 140 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SCD5Q86SK9 330 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 NXPE1Q8N323 547 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 TFGQ92734 400 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 NELL2Q99435 816 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CA14Q9ULX7 337 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 A0A1B0GUL6 1792 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 PHIPQ8WWQ0 1821 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 MYH11P35749 1972 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 A0A1W2PP55 124 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 TULP3O75386 442 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 PAICSP22234 425 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 ADRM1Q16186 407 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 TMEM164Q5U3C3 297 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 ALKAL1Q6UXT8 129 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 ADGRG2Q8IZP9 1017 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 LMX1AQ8TE12 382 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 C1orf109Q9NX04 203 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 TEX264Q9Y6I9 313 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 XIRP1Q702N8 1843 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 KIAA0355O15063 1070 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 SIN3BO75182 1162 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ZMPSTE24O75844 475 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ALDH4A1P30038 563 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 GKP32189 559 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC26A3P40879 764 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC34A1Q06495 639 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 DSC1Q08554 894 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 EPS8Q12929 822 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 SP140Q13342 867 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 FBXO48Q5FWF7 155 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 CLEC6AQ6EIG7 209 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ERICH5Q6P6B1 374 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TAS1R1Q7RTX1 841 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ZC3HC1Q86WB0 502 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 DPP10Q8N608 796 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TRAM1L1Q8N609 369 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 RBM18Q96H35 190 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 OSER1Q9NX31 292 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TRPS1Q9UHF7 1281 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ADGRE2Q9UHX3 823 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ARHGEF9O43307 516 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 MAFKO60675 156 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 C5AR1P21730 350 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 GRIA3P42263 894 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TNK2Q07912 1038 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 MGAT3Q09327 533 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TMEM25Q86YD3 366 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 DCBLD1Q8N8Z6 715 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 OR52L1Q8NGH7 329 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 EXOSC8Q96B26 276 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 RTKNQ9BST9 563 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 FBXW2Q9UKT8 454 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 CCNYL3P0C7X3 344 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 DRD1P21728 446 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 HNF1BP35680 557 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 HERVK_113P63132 956 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 KLF10Q13118 480 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 PROSER1Q86XN7 944 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 POMGNT2Q8NAT1 580 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM3CQ92520 227 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 NACC2Q96BF6 587 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ERVK-6Q9BXR3 956 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC32A1Q9H598 525 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ANKHQ9HCJ1 492 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ZC4H2Q9NQZ6 224 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 ACSL5Q9ULC5 683 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 KCNK6Q9Y257 313 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 KCTD3Q9Y597 815 aa9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 COPG1Q9Y678 874 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-208ENST00000615606 TTC34A8MYJ7 566 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 H3BQ06 376 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 RNGTTO60942 597 aaKnown RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 ATP6V1B1P15313 513 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 CEBPBP17676 345 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms