RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 PREPP48147 710 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PRLHRP49683 370 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 DGKEP52429 567 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PRKAA2P54646 552 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 NAGLUP54802 743 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 DNAJB13P59910 316 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 CSTF1Q05048 431 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 HSPA14Q0VDF9 509 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SFSWAPQ12872 951 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 FOXC1Q12948 553 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 GTF2H3Q13889 308 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 RCN2Q14257 317 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 GBX1Q14549 363 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 INPP5AQ14642 412 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 AGERQ15109 404 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 ZNF528Q3MIS6 628 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 BCL7AQ4VC05 210 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 FBXO48Q5FWF7 155 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 FAM219BQ5XKK7 198 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SYT13Q7L8C5 426 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SPATA21Q7Z572 469 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PIGWQ7Z7B1 504 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 RETREG3Q86VR2 466 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 GPSM1Q86YR5 675 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 CACNA2D3Q8IZS8 1091 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 MYO1HQ8N1T3 1032 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 TSTD1Q8NFU3 115 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 OR2T34Q8NGX1 318 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 RFWD2Q8NHY2 731 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PRR7Q8TB68 274 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SREK1Q8WXA9 508 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PDLIM5Q96HC4 596 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 CCM2Q9BSQ5 444 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 LGR4Q9BXB1 951 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 TPSD1Q9BZJ3 242 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SHCBP1LQ9BZQ2 653 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 ZCCHC2Q9C0B9 1178 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 WDR26Q9H7D7 661 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 TRIM39Q9HCM9 518 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 LATS2Q9NRM7 1088 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 THAP1Q9NVV9 213 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 USP36Q9P275 1121 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 KLHL42Q9P2K6 505 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 MARCOQ9UEW3 520 aaPredicted RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 DCTN4Q9UJW0 460 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 CYP8B1Q9UNU6 501 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 DNAJC16Q9Y2G8 782 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PRKAB1Q9Y478 270 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 OR1A2Q9Y585 309 aa7.94□□□□□ -1.14
TARDBP-213ENST00000611963 SNRNP200O75643 2136 aaKnown RBP7.94□□□□□ -1.14
TARDBP-213ENST00000611963 PI4KAP42356 2102 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 LRRC72A6NJI9 287 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 TMEM114B3SHH9 223 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 K7ESF4 209 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 QSOX1O00391 747 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 LCE2BO14633 110 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SIX3O95343 332 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SEMA4FO95754 770 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 HSPA4LO95757 839 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 LMNAP02545 664 aaKnown RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CHRNGP07510 517 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 TPBGLP0DKB5 382 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 TROVE2P10155 538 aaKnown RBP eCLIP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 JUNDP17535 347 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 TSPAN8P19075 237 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 GRK2P25098 689 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 PXNP49023 591 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 AGTR2P50052 363 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CLDN2P57739 230 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 NFKB2Q00653 900 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 ASPHQ12797 758 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 PHKG1Q16816 387 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 PFKFB4Q16877 469 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 C18orf21Q32NC0 220 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 MAP7D1Q3KQU3 841 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SYTL3Q4VX76 610 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 UNC50Q53HI1 259 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CFAP157Q5JU67 520 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 PLEKHS1Q5SXH7 462 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 GKAP1Q5VSY0 366 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SBSNQ6UWP8 590 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CYHR1Q6ZMK1 362 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 MBOAT1Q6ZNC8 495 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 FRA10AC1Q70Z53 315 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 ZNF771Q7L3S4 317 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-213ENST00000611963 ADAMTSL2Q86TH1 951 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 TRIM69Q86WT6 500 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CRLF3Q8IUI8 442 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SLC22A9Q8IVM8 553 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 ZNF547Q8IVP9 402 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 LSMEM2Q8N112 164 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SYNPOQ8N3V7 929 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 FBXO39Q8N4B4 442 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 SUMF1Q8NBK3 374 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 CCDC197Q8NCU1 140 aa7.93□□□□□ -1.14
TARDBP-213ENST00000611963 STAG3L4Q8TBR4 150 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms