RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 MARCKSL1P49006 195 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 LMAN1P49257 510 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 ABRQ12979 859 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 MPP3Q13368 585 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 GALNT11Q8NCW6 608 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 FERD3LQ96RJ6 166 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 NRTNQ99748 197 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 HEMGNQ9BXL5 484 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 SRMSQ9H3Y6 488 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 FAM96AQ9H5X1 160 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 SLAMF7Q9NQ25 335 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 CASS4Q9NQ75 786 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 SMOXQ9NWM0 555 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 SEMA5BQ9P283 1151 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 ACSL5Q9ULC5 683 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
HMGB1P24-201ENST00000611897 UNC79Q9P2D8 2635 aa13□□□□□ -0.33
HMGB1P24-201ENST00000611897 hCG_1818297A0A087WSY0 165 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 C2orf81A6NN90 581 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 MEN1O00255 615 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 CCL22O00626 93 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 PSTPIP1O43586 416 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 SRP72O76094 671 aaKnown RBP12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 TMEM63AO94886 807 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 RECKO95980 971 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 EPOP01588 193 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 RALBP11234 206 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 PVRP15151 417 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 NDUFS1P28331 727 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 OTX2P32243 289 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 GEMP55040 296 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 GSDMDP57764 484 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 TFDP3Q5H9I0 405 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 SYTL1Q8IYJ3 562 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 LCN9Q8WX39 176 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 RBM41Q96IZ5 413 aaKnown RBP12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 VAT1Q99536 393 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 HGH1Q9BTY7 390 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 GBA3Q9H227 469 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 POMT2Q9UKY4 750 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 BTRCQ9Y297 605 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 ZNF451Q9Y4E5 1061 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 CCDC88CQ9P219 2028 aa12.99□□□□□ -0.33
HMGB1P24-201ENST00000611897 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 MYO9AB2RTY4 2548 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 CCDC66A2RUB6 948 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 C9J4A7 227 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 SEMA7AO75326 666 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 ST6GAL1P15907 406 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 ITGALP20701 1170 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 PSMB4P28070 264 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 RBL1P28749 1068 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 MRPL49Q13405 166 aaKnown RBP12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 ATP1A4Q13733 1029 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 LAMB3Q13751 1172 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 DEFB110Q30KQ9 67 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 PLEKHS1Q5SXH7 462 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 IZUMO3Q5VZ72 239 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 ITPRIPL1Q6GPH6 555 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 FAM198BQ6UWH4 519 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 HOOK3Q86VS8 718 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 DSELQ8IZU8 1212 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 FDCSPQ8NFU4 85 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 OR8K5Q8NH50 307 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 HM13Q8TCT9 377 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 N4BP2L2Q92802 583 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 TRHDEQ9UKU6 1024 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 TCFL5Q9UL49 500 aa12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 PCDHGA9Q9Y5G4 932 aaKnown RBP12.98□□□□□ -0.33
HMGB1P24-201ENST00000611897 CREBBPQ92793 2442 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 CFAP99D6REC4 459 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 IFRD1O00458 451 aaPredicted RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 BTN3A1O00481 513 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 MAP3K7O43318 606 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 DPM1O60762 260 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 ANXA9O76027 345 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 RNF224P0DH78 156 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 CTNNA2P26232 953 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 PRLHRP49683 370 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 VAV2P52735 878 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 ITGA1P56199 1179 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 PRKG2Q13237 762 aa12.97□□□□□ -0.33
HMGB1P24-201ENST00000611897 TAF1AQ15573 450 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms