RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CDH1P12830 882 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CYP2A7P20853 494 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 VARSP26640 1264 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PTGER3P43115 390 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 KIR3DL1P43629 444 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RUNX1T1Q06455 604 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SEMA3BQ13214 749 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SYT16Q17RD7 645 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 XKR6Q5GH73 641 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ZDHHC21Q8IVQ6 265 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 HS3ST5Q8IZT8 346 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM9CQ8IZT9 166 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ELMOD1Q8N336 334 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM199Q8N511 208 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 LINC01465Q8N7H1 131 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKFN1Q8N957 763 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM159Q96B96 161 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ITCHQ96J02 903 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CDK5RAP1Q96SZ6 601 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TSEN34Q9BSV6 310 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TTPALQ9BTX7 342 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 DERL2Q9GZP9 239 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MUC13Q9H3R2 512 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RPF2Q9H7B2 306 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM248Q9NWD8 314 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 NUDT4Q9NZJ9 180 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 IKZF3Q9UKT9 509 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SPO11Q9Y5K1 396 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 GLYATL1P3A0A0U1RQE8 302 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PRAMEF11O60813 436 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 TULP3O75386 442 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 C8BP07358 591 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SBK3P0C264 359 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM163BP0C2L3 166 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 BMP2P12643 396 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 EPHB3P54753 998 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 DEFA1P59665 94 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 DEFA3P59666 94 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MCCD1P59942 119 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CACNG1Q06432 222 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ILF2Q12905 390 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 TOP3AQ13472 1001 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SMYD5Q6GMV2 418 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FUT10Q6P4F1 479 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKS3Q6ZW76 656 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 RRM2BQ7LG56 351 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GOLGA7Q7Z5G4 137 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CHERPQ8IWX8 916 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MINDY1Q8N5J2 469 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 KRTCAP2Q8N6L1 136 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MCFD2Q8NI22 146 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM110BQ8TC76 370 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 NAA50Q9GZZ1 169 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 EPS8L2Q9H6S3 715 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ADPRHL2Q9NX46 363 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FLRT1Q9NZU1 646 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 DNAJB9Q9UBS3 223 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ARIH1Q9Y4X5 557 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 A0A1B0GVM2 712 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GLTPD2A6NH11 291 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 LOC730098B7Z3J9 87 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CLDN25C9JDP6 229 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 H3BN98 237 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 LDB2O43679 373 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 XYLBO75191 536 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 NDUFS2O75306 463 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GLUD1P00367 558 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 RPLP2P05387 115 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 POU2F1P14859 743 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FDXRP22570 491 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC26A3P40879 764 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MAGEA12P43365 314 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GATMP50440 423 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CDH4P55283 916 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 KCNAB2Q13303 367 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GRM2Q14416 872 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 INAQ16352 499 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SULT1C3Q6IMI6 304 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GPR153Q6NV75 609 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CACUL1Q86Y37 369 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ZBTB2Q8N680 514 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 DBF4BQ8NFT6 615 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 RAB2BQ8WUD1 216 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 NUDT8Q8WV74 236 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FUBP3Q96I24 572 aaKnown RBP eCLIP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GPR78Q96P69 363 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MTERF1Q99551 399 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKRD60Q9BZ19 345 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 AIG1Q9NVV5 245 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 OGDHLQ9ULD0 1010 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ST14Q9Y5Y6 855 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 KNL1Q8NG31 2342 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 TCRBV3S1A0A5B6 114 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MFN2O95140 757 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 RASAL1O95294 804 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms