RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CHID1Q9BWS9 393 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 TRIT1Q9H3H1 467 aaKnown RBP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 AKTIPQ9H8T0 292 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 MRPS33Q9Y291 106 aaKnown RBP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 hCG_2039718K7EN88 272 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 KERAO60938 352 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 PPIGQ13427 754 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 HERC3Q15034 1050 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 CARD16Q5EG05 197 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 MS4A13Q5J8X5 152 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 CAND1Q86VP6 1230 aaKnown RBP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 NSMCE3Q96MG7 304 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 SUV39H2Q9H5I1 410 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 OSER1Q9NX31 292 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 CNTN5O94779 1100 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 IFNW1P05000 195 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 CCR3P51677 355 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 TAB1Q15750 504 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 DDI2Q5TDH0 399 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 HDDC2Q7Z4H3 204 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 HTATIP2Q9BUP3 242 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 PRDM8Q9NQV8 689 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 SSR3Q9UNL2 185 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 SATB2Q9UPW6 733 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 ERVW-1Q9UQF0 538 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 RGS10O43665 173 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 YAP1P46937 504 aaKnown RBP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 HMGCS1Q01581 520 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 S100ZQ8WXG8 99 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 EBF2Q9HAK2 575 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 SRRDQ9UH36 339 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 RUVBL1Q9Y265 456 aaKnown RBP14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
PCDHB16-201ENST00000609684 OR1F1O43749 312 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 TMCC2O75069 709 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 XRCC1P18887 633 aaPredicted RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 TPP2P29144 1249 aaPredicted RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SRFBP1Q8NEF9 429 aaKnown RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 GTPBP1O00178 669 aaKnown RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 GJA1P17302 382 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PITX1P78337 314 aaPredicted RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 UBXN11Q5T124 520 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 TIFABQ6ZNK6 161 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 FAM220AQ7Z4H9 259 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PTPN18Q99952 460 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SEZ6LQ9BYH1 1024 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 BRINP2Q9C0B6 783 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 CYTH4Q9UIA0 394 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 MTHFD1P11586 935 aaKnown RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SLC11A1P49279 550 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 ATAT1Q5SQI0 421 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 CHST15Q7LFX5 561 aaPredicted RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 OR2AG1Q9H205 316 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 GALPQ9UBC7 116 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 H3BNX3 289 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 STX16-NPEPL1H3BU86 382 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SERPINA1P01009 418 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 VIPP01282 170 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 JAK1P23458 1154 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PRMT2P55345 433 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 HSPB3Q12988 150 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 GPR17Q13304 367 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PCLAFQ15004 111 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 LDLRAP1Q5SW96 308 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 MBLAC2Q68D91 279 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 PHC3Q8NDX5 983 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 MCFD2Q8NI22 146 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
PCDHB16-201ENST00000609684 CDC7O00311 574 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SCAMP1O15126 338 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 IL12RB1P42701 662 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 PNLIPRP1P54315 467 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 OLR1P78380 273 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SRSF11Q05519 484 aaKnown RBP14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 ZDHHC21Q8IVQ6 265 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SLC9A6Q92581 669 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 TMEM209Q96SK2 561 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SLC39A3Q9BRY0 314 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 KIFC1Q9BW19 673 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 MRPL39Q9NYK5 338 aaKnown RBP14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 PSMD11O00231 422 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 MTX2O75431 263 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 CAPN15O75808 1086 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 EDNRBP24530 442 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 CDH12P55289 794 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SRP54P61011 504 aaKnown RBP14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 NFKB2Q00653 900 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 ZNF33AQ06730 810 aa14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 SOX4Q06945 474 aaPredicted RBP14.02□□□□□ -0.16
PCDHB16-201ENST00000609684 CHRNA6Q15825 494 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms