RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TMEM26Q6ZUK4 368 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 PDZD3Q86UT5 571 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 CACTIN-AS1Q8N1I8 211 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 OR10G6Q8NH81 332 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 KCNJ9Q92806 393 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 AHCYL2Q96HN2 611 aaKnown RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 GFM1Q96RP9 751 aaKnown RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 SYNDIG1Q9H7V2 258 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 LRRC4CQ9HCJ2 640 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 SLC40A1Q9NP59 571 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 TXNDC16Q9P2K2 825 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 KLHL42Q9P2K6 505 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 CORO1CQ9ULV4 474 aaPredicted RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 TCRBV9S1A1TA0A576 114 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 LILRA5A6NI73 299 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 NIPSNAP2O75323 286 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 VPS26AO75436 327 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 GPC4O75487 556 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 SLCO2B1O94956 709 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 JUPP14923 745 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 PDHA2P29803 388 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 PPM1FP49593 454 aaPredicted RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 OR1D5P58170 312 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 CCL7P80098 99 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 SLMAPQ14BN4 828 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 HES3Q5TGS1 186 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 CNSTQ6PJW8 725 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 XKR5Q6UX68 686 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 RBM44Q6ZP01 1051 aaKnown RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 TMPRSS7Q7RTY8 843 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 SLC22A15Q8IZD6 547 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 EIF1ADQ8N9N8 165 aaKnown RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 LKAAEAR1Q8TD35 194 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 RMDN2Q96LZ7 410 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 DEPDC7Q96QD5 511 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 FERD3LQ96RJ6 166 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 MVB12BQ9H7P6 319 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 LATS2Q9NRM7 1088 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 CLCA2Q9UQC9 943 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 CFAP20Q9Y6A4 193 aaKnown RBP13.93□□□□□ -0.18
CTSA-219ENST00000607841 PLXNB3Q9ULL4 1909 aa13.93□□□□□ -0.18
CTSA-219ENST00000607841 IGHV1OR21-1A0A087WYE8 117 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 NTN3O00634 580 aaPredicted RBP13.92□□□□□ -0.18
CTSA-219ENST00000607841 B4GAT1O43505 415 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 DUX1O43812 170 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 KDM1AO60341 852 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 CPNE6O95741 557 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 MT-CO3P00414 261 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 RPN2P04844 631 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 GABRB3P28472 473 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 ECHS1P30084 290 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 SKIV2L2P42285 1042 aaKnown RBP13.92□□□□□ -0.18
CTSA-219ENST00000607841 CSE1LP55060 971 aaKnown RBP13.92□□□□□ -0.18
CTSA-219ENST00000607841 GPX6P59796 221 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 SQSTM1Q13501 440 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 GPR18Q14330 331 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 AMZ1Q400G9 498 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 CDCP2Q5VXM1 449 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 ZNF549Q6P9A3 640 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 KLHL35Q6PF15 583 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 STRA8Q7Z7C7 330 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 PIM3Q86V86 326 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 GRAMD1AQ96CP6 724 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 FOPNLQ96NB1 174 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
CTSA-219ENST00000607841 TAS2R13Q9NYV9 303 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 NFU1Q9UMS0 254 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 ASF1AQ9Y294 204 aa13.92□□□□□ -0.18
CTSA-219ENST00000607841 PCNX2A6NKB5 2137 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 ARID1BQ8NFD5 2236 aaPredicted RBP13.91□□□□□ -0.18
CTSA-219ENST00000607841 A0A1W2PQM1 296 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 FAM159BA6NKW6 160 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 HYAL3O43820 417 aaPredicted RBP13.91□□□□□ -0.18
CTSA-219ENST00000607841 AMD1P17707 334 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 ACADLP28330 430 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 CD1CP29017 333 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 ATP5DP30049 168 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 CLCN7P51798 805 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 NAB1Q13506 487 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 PLCL1Q15111 1095 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 KYNUQ16719 465 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 TTC23LQ6PF05 361 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 ZNF761Q86XN6 746 aaPredicted RBP13.91□□□□□ -0.18
CTSA-219ENST00000607841 CTAGE3PQ8IX95 158 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 TBC1D21Q8IYX1 336 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 DCBLD1Q8N8Z6 715 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms