RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LINC00301Q8NCQ3 95 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DBF4BQ8NFT6 615 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 OR7D4Q8NG98 312 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GRPEL2Q8TAA5 225 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DUSP19Q8WTR2 217 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 KBTBD7Q8WVZ9 684 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LPGAT1Q92604 370 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DDX17Q92841 729 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 MAP4K1Q92918 833 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FBXL20Q96IG2 436 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 C17orf62Q9BQA9 187 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 COLEC11Q9BWP8 271 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DCLK3Q9C098 648 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 OR2B2Q9GZK3 357 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC6A17Q9H1V8 727 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LHX5Q9H2C1 402 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PLEKHA2Q9HB19 425 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TIGARQ9NQ88 270 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PRDM6Q9NQX0 595 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM184CQ9NVA4 438 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RSL24D1Q9UHA3 163 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TSPAN16Q9UKR8 245 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PCDHA1Q9Y5I3 950 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LYVE1Q9Y5Y7 322 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 METP08581 1390 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 MYH8P13535 1937 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A0A0MRY4 1105 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 A6NL46 340 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 EVPLLA8MZ36 301 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PSMD11O00231 422 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 NOP56O00567 594 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 OGTO15294 1046 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ATG13O75143 517 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 MT-ND5P03915 603 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GALTP07902 379 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DBTP11182 482 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF18P17022 549 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GABRB3P28472 473 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TALDO1P37837 337 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC15A1P46059 708 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FASLGP48023 281 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RAP1GDS1P52306 607 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 STX17P56962 302 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ACTR3P61158 418 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GALK2Q01415 458 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GHRHRQ02643 423 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM115Q12893 351 aaPredicted RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SELENBP1Q13228 472 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 STX3Q13277 289 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SNTB2Q13425 540 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 IL11RAQ14626 422 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TSC22D1Q15714 1073 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 USP41Q3LFD5 358 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 KHDC1Q4VXA5 237 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ADGRF1Q5T601 910 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ARMC6Q6NXE6 501 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 IZUMO2Q6UXV1 221 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TMPRSS9Q7Z410 1059 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CNGA4Q8IV77 575 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SELENOHQ8IZQ5 122 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF366Q8N895 744 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 KCTD4Q8WVF5 259 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 APBB2Q92870 758 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 HMCESQ96FZ2 354 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CAPZA3Q96KX2 299 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF560Q96MR9 790 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LRRC37BQ96QE4 947 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GAL3ST4Q96RP7 486 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 EFHD1Q9BUP0 239 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TPPP3Q9BW30 176 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 JPH1Q9HDC5 661 aaPredicted RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ZDHHC4Q9NPG8 344 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM105AQ9NUU6 356 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FZD10Q9ULW2 581 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNK6Q9Y257 313 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ERGIC3Q9Y282 383 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SBF1O95248 1867 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PCM1Q15154 2024 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF98A6NK75 572 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 A8MXQ7 604 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 LINC01387J3KSC0 135 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 WRBO00258 174 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TOR1AO14656 332 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 DFNA5O60443 496 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MFAP3LO75121 409 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 LCATP04180 440 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SERPINF2P08697 491 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HOXD8P13378 290 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PFKFB1P16118 471 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP2B6P20813 491 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TYK2P29597 1187 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MMP13P45452 471 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NPY2RP49146 381 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HK2P52789 917 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ARSFP54793 590 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms