RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 KLHL6Q8WZ60 621 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 ART4Q93070 314 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.13□□□□□ -0.47
C19orf54-208ENST00000598352 TGM7Q96PF1 710 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 NAPGQ99747 312 aaPredicted RBP12.13□□□□□ -0.47
C19orf54-208ENST00000598352 NRTNQ99748 197 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 TRIM56Q9BRZ2 755 aaKnown RBP12.13□□□□□ -0.47
C19orf54-208ENST00000598352 KLHL3Q9UH77 587 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 B3GALT1Q9Y5Z6 326 aa12.13□□□□□ -0.47
C19orf54-208ENST00000598352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.476e-8■■■■□ 25.1
C19orf54-208ENST00000598352 GOLGA6L10A0A0M3HER8 536 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 QSOX1O00391 747 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 LIN7AO14910 233 aaPredicted RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 KLK10O43240 276 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 VAPBO95292 243 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 FTH1P02794 183 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 CCR7P32248 378 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 TGIF1Q15583 401 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 FASTKD1Q53R41 847 aaKnown RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 C17orf53Q8N3J3 647 aaPredicted RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 PHC3Q8NDX5 983 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 GRK7Q8WTQ7 553 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 SIGLEC10Q96LC7 697 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 SERPINB12Q96P63 405 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 DDA1Q9BW61 102 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 ZNF768Q9H5H4 540 aaKnown RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 VPS37BQ9H9H4 285 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
C19orf54-208ENST00000598352 FBXO8Q9NRD0 319 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 CATSPERZQ9NTU4 200 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 SLC39A1Q9NY26 324 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 HEBP2Q9Y5Z4 205 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 LOC400499M0QZD8 3231 aa12.12□□□□□ -0.47
C19orf54-208ENST00000598352 IGHV5-51A0A0C4DH38 117 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 ZCWPW2A0A1B0GU75 182 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 FAM237BA0A1B0GVD1 139 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 OR5K3A6NET4 321 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SDR42E2A6NKP2 422 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 IQCF5A8MTL0 148 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 GOLGA8MH3BSY2 632 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 GPC4O75487 556 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 OR56A5P0C7T3 313 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TPBGLP0DKB5 382 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 NDUFS1P28331 727 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SARNPP82979 210 aaKnown RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 PTK6Q13882 451 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 BOP1Q14137 746 aaKnown RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TYSND1Q2T9J0 566 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 AARS2Q5JTZ9 985 aaKnown RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 KIAA0930Q6ICG6 404 aaPredicted RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 PPIL6Q8IXY8 311 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SNRNP27Q8WVK2 155 aaKnown RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
C19orf54-208ENST00000598352 ZDHHC12Q96GR4 267 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TTC1Q99614 292 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 MVB12BQ9H7P6 319 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 APMAPQ9HDC9 416 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SAR1BQ9Y6B6 198 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
C19orf54-208ENST00000598352 ATRXP46100 2492 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 GOLGA8TH3BQL2 631 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 NELFEP18615 380 aaKnown RBP12.1□□□□□ -0.47
C19orf54-208ENST00000598352 RPS3P23396 243 aaKnown RBP eCLIP12.1□□□□□ -0.47
C19orf54-208ENST00000598352 CD82P27701 267 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 AOAHP28039 575 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 PPARGP37231 505 aaPredicted RBP12.1□□□□□ -0.47
C19orf54-208ENST00000598352 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
C19orf54-208ENST00000598352 TTPAP49638 278 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 SH3BP2P78314 561 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 PLOD1Q02809 727 aaPredicted RBP12.1□□□□□ -0.47
C19orf54-208ENST00000598352 BRD3Q15059 726 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 CACHD1Q5VU97 1274 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 IRGCQ6NXR0 463 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 FAM92BQ6ZTR7 304 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
C19orf54-208ENST00000598352 ACVR1CQ8NER5 493 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms