RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 FGF3P11487 239 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 PAMP19021 973 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 NDUFS1P28331 727 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 MAPK10P53779 464 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 GFERP55789 205 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 PLOD1Q02809 727 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 MRNIPQ6NTE8 343 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 SYT10Q6XYQ8 523 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 PDZD3Q86UT5 571 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 JAMLQ86YT9 394 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 JPH3Q8WXH2 748 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 C9orf72Q96LT7 481 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 FCRL3Q96P31 734 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 TCF12Q99081 682 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 CARD6Q9BX69 1037 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 P2RY12Q9H244 342 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 SLC24A2Q9UI40 661 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 RPS6KL1Q9Y6S9 549 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 ZCWPW2A0A1B0GU75 182 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 GOLGA8TH3BQL2 631 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 CAPN5O15484 640 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-204ENST00000597724 TTI1O43156 1089 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 NDUFS3O75489 264 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 ANKRD34CP0C6C1 535 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 SLC5A2P31639 672 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
SSBP4-204ENST00000597724 DHX34Q14147 1143 aaKnown RBP16.31■□□□□ 0.2
SSBP4-204ENST00000597724 KRT33BQ14525 404 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 BRD3Q15059 726 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 PLCL1Q15111 1095 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 NEPROQ6NW34 567 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 KLHL35Q6PF15 583 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 NAPRTQ6XQN6 538 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 SDCCAG8Q86SQ7 713 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-204ENST00000597724 OTUD6BQ8N6M0 293 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-204ENST00000597724 USP7Q93009 1102 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 TGM7Q96PF1 710 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 TSSK1BQ9BXA7 367 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 B3GNT4Q9C0J1 378 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 OCIAD1Q9NX40 245 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 KLHL3Q9UH77 587 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 MAD1L1Q9Y6D9 718 aa16.31■□□□□ 0.2
SSBP4-204ENST00000597724 IQCF5A8MTL0 148 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 C9orf172C9J069 976 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 TOX3O15405 576 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 KRT37O76014 449 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 USP1O94782 785 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 ITGB6P18564 788 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 RPS3P23396 243 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 ACADLP28330 430 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 CCR7P32248 378 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 LEPRP48357 1165 aaKnown RBP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 LRRC69Q6ZNQ3 347 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 LRRC6Q86X45 466 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 BMPERQ8N8U9 685 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 SPATA4Q8NEY3 305 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 LKAAEAR1Q8TD35 194 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 ZNF669Q96BR6 464 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-204ENST00000597724 ZDHHC12Q96GR4 267 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 TAAR9Q96RI9 348 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 FERD3LQ96RJ6 166 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 KRT12Q99456 494 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 TRIM51Q9BSJ1 452 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 MVB12BQ9H7P6 319 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 ACSL6Q9UKU0 697 aa16.3■□□□□ 0.2
SSBP4-204ENST00000597724 UBA6A0AVT1 1052 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 EFCAB7A8K855 629 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 B4E171 279 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 PFDN6O15212 129 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 GPC4O75487 556 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 OGNP20774 298 aaKnown RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 ITPKBP27987 946 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 AOAHP28039 575 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 TSPAN7P41732 249 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 ADARP55265 1226 aaKnown RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 MORF4L2Q15014 288 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 SYTL3Q4VX76 610 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 RNF187Q5TA31 235 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 TMEM164Q5U3C3 297 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 PTRHD1Q6GMV3 140 aaKnown RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 IRGCQ6NXR0 463 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 CENPUQ71F23 418 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 FAM129CQ86XR2 697 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 CILP2Q8IUL8 1156 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 KCNE4Q8WWG9 221 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 ASZ1Q8WWH4 475 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 LPGAT1Q92604 370 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 ART4Q93070 314 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 STAMBPL1Q96FJ0 436 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms