RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PCDHGC4Q9Y5F7 938 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 MTCL1Q9Y4B5 1905 aaKnown RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 A0A087X1B8 175 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 TARM1B6A8C7 271 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 SLC7A4O43246 635 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 MPSTP25325 297 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 CCR10P46092 362 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 NKX2-5P52952 324 aaPredicted RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 STX1BP61266 288 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 DNASE1L3Q13609 305 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 CAMK1Q14012 370 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 HERC3Q15034 1050 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 CHSY3Q70JA7 882 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 LDB1Q86U70 411 aaPredicted RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 SPNS2Q8IVW8 549 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 APCDD1Q8J025 514 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 BRSK1Q8TDC3 778 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 RASSF5Q8WWW0 418 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 VMP1Q96GC9 406 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 TBATAQ96M53 351 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 MFSD1Q9H3U5 465 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 ATP13A3Q9H7F0 1226 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 MARCH4Q9P2E8 410 aaPredicted RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 CDH23Q9H251 3354 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 SOCS2O14508 198 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 DLX3O60479 287 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 MT-CO1P00395 513 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 BMP2P12643 396 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 SLC7A1P30825 629 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 PSMD8P48556 350 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 ACVR1Q04771 509 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 SLC36A3Q495N2 470 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 SLC9B1Q4ZJI4 515 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 C6orf10Q5SRN2 563 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 CILP2Q8IUL8 1156 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 CPXM2Q8N436 756 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 HEXDCQ8WVB3 486 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 USP13Q92995 863 aaPredicted RBP15.15■□□□□ 0.02
PNKP-204ENST00000594661 B3GNT4Q9C0J1 378 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 SP140LQ9H930 580 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 ENPP5Q9UJA9 477 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 RAP2CQ9Y3L5 183 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 GPSM3Q9Y4H4 160 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 RAI2Q9Y5P3 530 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 HELZP42694 1942 aaKnown RBP15.15■□□□□ 0.02
PNKP-204ENST00000594661 MYO7AQ13402 2215 aa15.15■□□□□ 0.02
PNKP-204ENST00000594661 K7ERQ8 282 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 GRM6O15303 877 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 DYRK3O43781 588 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 MOSPD3O75425 235 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 PIGNO95427 931 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 NTRK1P04629 796 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CD1EP15812 388 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 EPCAMP16422 314 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 SERPINB1P30740 379 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 HLCSP50747 726 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CLCN5P51795 746 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CSHL1Q14406 222 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 TEAD2Q15562 447 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 FXNQ16595 210 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ARL13AQ5H913 290 aaPredicted RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 CEP78Q5JTW2 689 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 GPR158Q5T848 1215 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 RNF148Q8N7C7 305 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 DCAF4L2Q8NA75 395 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 MAPK15Q8TD08 544 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 RCN3Q96D15 328 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 RMDN1Q96DB5 314 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ADI1Q9BV57 179 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CLPBQ9H078 707 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CD320Q9NPF0 282 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 MOSPD1Q9UJG1 213 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 TESMINQ9Y4I5 508 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 SNX13Q9Y5W8 968 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ANKRD36A6QL64 1941 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 TCRBV3S1A0A5B6 114 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ZSCAN5BA6NJL1 495 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ASNA1O43681 348 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 EEF1DP29692 281 aaKnown RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 SERPINB5P36952 375 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 RPL14P50914 215 aaKnown RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 KPNA2P52292 529 aaKnown RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 EPHA5P54756 1037 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 PRKCQQ04759 706 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 INO80DQ53TQ3 878 aaPredicted RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 ATXN7L2Q5T6C5 722 aaPredicted RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 INTS11Q5TA45 600 aaKnown RBP15.14■□□□□ 0.01
PNKP-204ENST00000594661 GTF2IRD2BQ6EKJ0 949 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 TMC5Q6UXY8 1006 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 NEK10Q6ZWH5 1172 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 GTF2IRD2Q86UP8 949 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 SLC51BQ86UW2 128 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 ARMC8Q8IUR7 673 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 NATD1Q8N6N6 113 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 LPCAT1Q8NF37 534 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 SH3RF2Q8TEC5 729 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CSF3RQ99062 836 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 MRPL57Q9BQC6 102 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms