RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ZNF140P52738 457 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-243ENST00000593128 RPS15P62841 145 aaKnown RBP17.47■□□□□ 0.39
CIRBP-243ENST00000593128 CRTC2Q53ET0 693 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-243ENST00000593128 SNX20Q7Z614 316 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 LCN9Q8WX39 176 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 ALG3Q92685 438 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 PPP1R2P1Q96PQ5 205 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 SRMSQ9H3Y6 488 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 PACSIN2Q9UNF0 486 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-243ENST00000593128 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 HEBP2Q9Y5Z4 205 aa17.47■□□□□ 0.39
CIRBP-243ENST00000593128 KLHL33A6NCF5 533 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 GOLGA6L9A6NEM1 432 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 SLC9B1P1A6NJY1 282 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 C21orf140B9A014 251 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 K7EM74 188 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-243ENST00000593128 CPNE3O75131 537 aaKnown RBP17.46■□□□□ 0.39
CIRBP-243ENST00000593128 RFPL1O75677 317 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 DNAJB5O75953 348 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 PRSS56P0CW18 603 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 ATXN8OSP0DMR3 200 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 NDUFS1P28331 727 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 PTPN7P35236 360 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 PRLHRP49683 370 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 TUBB4BP68371 445 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 TUBB2AQ13885 445 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 POU6F1Q14863 301 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 ASB18Q6ZVZ8 466 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 BPHLQ86WA6 291 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-243ENST00000593128 D2HGDHQ8N465 521 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 FAM71DQ8N9W8 422 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 TEX19Q8NA77 164 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 PHC3Q8NDX5 983 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 CLIP3Q96DZ5 547 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 CALR3Q96L12 384 aaKnown RBP17.46■□□□□ 0.39
CIRBP-243ENST00000593128 ALS2CR12Q96Q35 445 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 TUBB2BQ9BVA1 445 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 LACRTQ9GZZ8 138 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 KLHL25Q9H0H3 589 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 FANCEQ9HB96 536 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 KCND1Q9NSA2 647 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 SEMA5BQ9P283 1151 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 TLK1Q9UKI8 766 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 AMFRQ9UKV5 643 aa17.46■□□□□ 0.39
CIRBP-243ENST00000593128 REXO2Q9Y3B8 237 aaKnown RBP17.46■□□□□ 0.39
CIRBP-243ENST00000593128 GRID2IPA4D2P6 1211 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 PTPN4P29074 926 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 PREPP48147 710 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 KLRB1Q12918 225 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 CHAF1BQ13112 559 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 PRAMEF17Q5VTA0 474 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 CAPRIN2Q6IMN6 1127 aaKnown RBP17.45■□□□□ 0.38
CIRBP-243ENST00000593128 DENND5AQ6IQ26 1287 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 PEX26Q7Z412 305 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 SERPINA9Q86WD7 417 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 UBL4BQ8N7F7 174 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 ACVR1CQ8NER5 493 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 HEXDCQ8WVB3 486 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 ZFPM2Q8WW38 1151 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 LINC00615Q96LM1 132 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-243ENST00000593128 FCRL4Q96PJ5 515 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 NRTNQ99748 197 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 HGH1Q9BTY7 390 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 SLC7A5P2Q9GIP4 190 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 COG4Q9H9E3 785 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 VPS37BQ9H9H4 285 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 ZDHHC3Q9NYG2 299 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 PCDHGA6Q9Y5G7 932 aa17.45■□□□□ 0.38
CIRBP-243ENST00000593128 CYSRT1A8MQ03 144 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 MAP3K7O43318 606 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 LDB2O43679 373 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 FTCDO95954 541 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 KLK3P07288 261 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-243ENST00000593128 ACRV1P26436 265 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 VAV2P52735 878 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 PMS2P54278 862 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 FOXK1P85037 733 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 GPS2Q13227 327 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 PRKG2Q13237 762 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 BRD3Q15059 726 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 CLDN19Q8N6F1 224 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 ZNF501Q96CX3 271 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-243ENST00000593128 XKR8Q9H6D3 395 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 FEZ2Q9UHY8 353 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-243ENST00000593128 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
CIRBP-243ENST00000593128 TNRC6AQ8NDV7 1962 aaKnown RBP17.44■□□□□ 0.38
CIRBP-243ENST00000593128 UBR5O95071 2799 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-243ENST00000593128 ARGFXA6NJG6 315 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 TMEM150CB9EJG8 249 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 BTN3A1O00481 513 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 METTL18O95568 372 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 CYP2A7P20853 494 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 PDHA2P29803 388 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 MSLNQ13421 630 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-243ENST00000593128 PARP6Q2NL67 630 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms