RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 SLC16A6O15403 523 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 LDB2O43679 373 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 RPS17P08708 135 aaKnown RBP15.52■□□□□ 0.08
MBD1-222ENST00000590208 UROSP10746 265 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 FCGRTP55899 365 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 SLC10A7Q0GE19 358 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 SIRPB2Q5JXA9 342 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 METTL4Q8N3J2 472 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 ARRDC4Q8NCT1 418 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 ZNF548Q8NEK5 533 aaPredicted RBP15.52■□□□□ 0.08
MBD1-222ENST00000590208 OR13C4Q8NGS5 318 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 QPCTLQ9NXS2 382 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 ZSWIM8A7E2V4 1837 aa15.52■□□□□ 0.08
MBD1-222ENST00000590208 PABPN1LA6NDY0 278 aaKnown RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 NPEPPSL1A6NEC2 478 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 J3KR12 359 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 M0QX08 132 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 CD3EAPO15446 510 aaKnown RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 HOXC11O43248 304 aaPredicted RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 IDH3BO43837 385 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 KERAO60938 352 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 PGLSO95336 258 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 HOXD8P13378 290 aaPredicted RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 TGFBR2P37173 567 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 GRIK1P39086 918 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 GPR162Q16538 588 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 NOTUMQ6P988 496 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 MICU2Q8IYU8 434 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 PHACTR4Q8IZ21 702 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 NLGN4XQ8N0W4 816 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 OR5K1Q8NHB7 308 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 STAG3L4Q8TBR4 150 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 NCLNQ969V3 563 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 FCRL2Q96LA5 508 aaPredicted RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 SLC25A51Q9H1U9 297 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 KAT8Q9H7Z6 458 aaKnown RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 GORASP2Q9H8Y8 452 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 RASSF1Q9NS23 344 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 AGO1Q9UL18 857 aaKnown RBP15.52■□□□□ 0.07
MBD1-222ENST00000590208 BOLA1Q9Y3E2 137 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 PKP3Q9Y446 797 aa15.52■□□□□ 0.07
MBD1-222ENST00000590208 PDCD11Q14690 1871 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 ISPDA4D126 451 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 HHLA1C9JL84 531 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 ARVCFO00192 962 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 MFN2O95140 757 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GLP2RO95838 553 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 DBTP11182 482 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 ALOX12P18054 663 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 PNPLA4P41247 253 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 CLK1P49759 484 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 CLK3P49761 638 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 GMPSP49915 693 aaPredicted RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 PWP1Q13610 501 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GRIK4Q16099 956 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 ZNF404Q494X3 552 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GTDC1Q4AE62 458 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GDPD3Q7L5L3 318 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 C14orf80Q86SX3 495 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 BLOC1S5Q8TDH9 187 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 FBLIM1Q8WUP2 373 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 PROX1Q92786 737 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 ZNF566Q969W8 418 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 KIAA1191Q96A73 305 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 ATP13A1Q9HD20 1204 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 SPO11Q9Y5K1 396 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 N6AMT1Q9Y5N5 214 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GJA3Q9Y6H8 435 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 DICER1Q9UPY3 1922 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 AGAP5A6NIR3 686 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 H0Y626 953 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 TRIM16O95361 564 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 NPPAP01160 153 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 PON2Q15165 354 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 SETMARQ53H47 684 aaPredicted RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 PPP2R2DQ66LE6 453 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 CYP20A1Q6UW02 462 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 DPP9Q86TI2 863 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 GATAD2AQ86YP4 633 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 FUBP1Q96AE4 644 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 IMP4Q96G21 291 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 CDK5RAP1Q96SZ6 601 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 YME1L1Q96TA2 773 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 C16orf70Q9BSU1 422 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 EIF2B4Q9UI10 523 aaKnown RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 PCTPQ9UKL6 214 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.51■□□□□ 0.07
MBD1-222ENST00000590208 TPRKBQ9Y3C4 175 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 POLR3HQ9Y535 204 aaPredicted RBP15.51■□□□□ 0.07
MBD1-222ENST00000590208 DNAH12Q6ZR08 3092 aa15.51■□□□□ 0.07
MBD1-222ENST00000590208 H3BRB1 525 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 CXCR6O00574 342 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 MMP2P08253 660 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 IGFBP5P24593 272 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 FMO4P31512 558 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 LIPAP38571 399 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 PGFP49763 221 aa15.5■□□□□ 0.07
MBD1-222ENST00000590208 ARPC4P59998 168 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms