RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
ZNF440-206ENST00000588954 IMP3Q9NV31 184 aaKnown RBP9.05□□□□□ -0.96
ZNF440-206ENST00000588954 TAS2R13Q9NYV9 303 aa9.05□□□□□ -0.96
ZNF440-206ENST00000588954 NINJ2Q9NZG7 142 aa9.05□□□□□ -0.96
ZNF440-206ENST00000588954 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
ZNF440-206ENST00000588954 RNF215Q9Y6U7 377 aa9.05□□□□□ -0.96
ZNF440-206ENST00000588954 ARID1BQ8NFD5 2236 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 COL5A1P20908 1838 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 LY6G6EA0A0G2JKS1 128 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 SLC5A10A0PJK1 596 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FAM159BA6NKW6 160 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 OR52A4PA6NMU1 304 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 GIPC1O14908 333 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 KDM1AO60341 852 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 NIPSNAP2O75323 286 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 ACSL3O95573 720 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 EML2O95834 649 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 RPN2P04844 631 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 TUBBP07437 444 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FTH1P19P0C7X4 201 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 BRAFP15056 766 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 SLC19A1P41440 591 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 GPR3P46089 330 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FASLGP48023 281 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PREPP48147 710 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PMS2P54278 862 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 SLC12A2P55011 1212 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CSE1LP55060 971 aaKnown RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CLCA4Q14CN2 919 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 RPE65Q16518 533 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 KBTBD12Q3ZCT8 623 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CTSL3PQ5NE16 218 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FAM45BPQ6NSW5 357 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 TTC23LQ6PF05 361 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CCNI2Q6ZMN8 369 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PDZD3Q86UT5 571 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 ZBTB2Q8N680 514 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 LILRA3Q8N6C8 439 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PPM1NQ8N819 430 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 GPATCH11Q8N954 259 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 Q8N9G6 341 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 WDR48Q8TAF3 677 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FAM45AQ8TCE6 357 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 ZFPM2Q8WW38 1151 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PATE1Q8WXA2 126 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 INPP5DQ92835 1189 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CCDC74AQ96AQ1 378 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 AHCYL2Q96HN2 611 aaKnown RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FOPNLQ96NB1 174 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CYTH2Q99418 400 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CPNE1Q99829 537 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CCDC3Q9BQI4 270 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 ANKZF1Q9H8Y5 726 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 TRMT6Q9UJA5 497 aaKnown RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 IKBKGQ9Y6K9 419 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 U3KQA8 63 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 LAMA1P25391 3075 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 WDR87Q6ZQQ6 2873 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 GOLGA4Q13439 2230 aaKnown RBP9.04□□□□□ -0.96
ZNF440-206ENST00000588954 PCNX2A6NKB5 2137 aa9.04□□□□□ -0.96
ZNF440-206ENST00000588954 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ARHGEF17Q96PE2 2063 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 A0A087WUV0 522 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 GPC4O75487 556 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 SLCO2B1O94956 709 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 F7P08709 466 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 GABRB3P28472 473 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 PDHA2P29803 388 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ALDH4A1P30038 563 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ATP5DP30049 168 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 SPRP35270 261 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 GP5P40197 560 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 MAPK9P45984 424 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 RGS4P49798 205 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 UBE2IP63279 158 aaKnown RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 GPLD1P80108 840 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ERCC6LQ2NKX8 1250 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ZNF658BQ4V348 819 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 GRTP1Q5TC63 336 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 HECTD2Q5U5R9 776 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 CAPRIN2Q6IMN6 1127 aaKnown RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 LRRC8EQ6NSJ5 796 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ZNF549Q6P9A3 640 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 NAPRTQ6XQN6 538 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 TMEM26Q6ZUK4 368 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 ZC3HC1Q86WB0 502 aaKnown RBP9.03□□□□□ -0.96
ZNF440-206ENST00000588954 SFTPA2Q8IWL1 248 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 SLC22A15Q8IZD6 547 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 OR10G6Q8NH81 332 aa9.03□□□□□ -0.96
ZNF440-206ENST00000588954 LKAAEAR1Q8TD35 194 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms