RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 ZSCAN1Q8NBB4 408 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 LSM14AQ8ND56 463 aaKnown RBP19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 NLGN4YQ8NFZ3 816 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 MAIP1Q8WWC4 291 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 EXTL1Q92935 676 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 RANBP9Q96S59 729 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 TCAF1Q9Y4C2 921 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 COLEC10Q9Y6Z7 277 aa19.53■□□□□ 0.72
TRAPPC6A-203ENST00000587818 OR5K3A6NET4 321 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 TK2O00142 265 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 FOLR1P15328 257 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 ITGB6P18564 788 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 NELFEP18615 380 aaKnown RBP19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 PRKG2Q13237 762 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 SEMA3AQ14563 771 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 DNTTIP2Q5QJE6 756 aaKnown RBP19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 ZNF534Q76KX8 674 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 RASGRP3Q8IV61 690 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 ZPBPQ9BS86 351 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 KIR3DX1Q9H7L2 352 aa19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 TTC7AQ9ULT0 858 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC6A-203ENST00000587818 TCRBV7S3A2A0A539 114 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 UBA6A0AVT1 1052 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 AP2A2O94973 939 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NSG1P42857 185 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 VPS41P49754 854 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 CSE1LP55060 971 aaKnown RBP19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 LAMB3Q13751 1172 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ITIH4Q14624 930 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ARMC6Q6NXE6 501 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 OOSP2Q86WS3 158 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 REXO1L1PQ8IX06 675 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 EXD3Q8N9H8 876 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SIDT2Q8NBJ9 832 aaKnown RBP19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 PPHLN1Q8NEY8 458 aaKnown RBP19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 OR4L1Q8NH43 312 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ZFPM2Q8WW38 1151 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ELMO1Q92556 727 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SLC12A9Q9BXP2 914 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 AP1M1Q9BXS5 423 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 XKR8Q9H6D3 395 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 VPS37BQ9H9H4 285 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 IL17BQ9UHF5 180 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ZKSCAN5Q9Y2L8 839 aa19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TMEM184BQ9Y519 407 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC6A-203ENST00000587818 IFRD1O00458 451 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SPAG6O75602 509 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 KIAA0754O94854 1291 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TIAF1O95411 115 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 DLGAP3O95886 979 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 EBLN1P0CF75 366 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 MAP4P27816 1152 aaKnown RBP19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NDUFS1P28331 727 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ARL4DP49703 201 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 KPNA2P52292 529 aaKnown RBP19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 PRAMEP78395 509 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 C19orf57Q0VDD7 668 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TBR1Q16650 682 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 FASTKD1Q53R41 847 aaKnown RBP19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 PCID2Q5JVF3 399 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TTC27Q6P3X3 843 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ZNF449Q6P9G9 518 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 AFTPHQ6ULP2 937 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 CES3Q6UWW8 571 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ZNF843Q8N446 348 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 GALNT6Q8NCL4 622 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 LCN9Q8WX39 176 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 UBXN4Q92575 508 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TFGQ92734 400 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 WBP1Q96G27 269 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SLC41A2Q96JW4 573 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ULBP3Q9BZM4 244 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SEMA5BQ9P283 1151 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 RIMKLBQ9ULI2 386 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 HEBP2Q9Y5Z4 205 aa19.5■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ATMQ13315 3056 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SMG1Q96Q15 3661 aaKnown RBP19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 BTN3A3O00478 584 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NKX2-8O15522 239 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 MGAT1P26572 445 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NMBRP28336 390 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 CD151P48509 253 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ACVR1Q04771 509 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 IL11RAQ14626 422 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NLRP9Q7RTR0 991 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 ACVR1CQ8NER5 493 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 HGH1Q9BTY7 390 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 SRMSQ9H3Y6 488 aa19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 GPN2Q9H9Y4 310 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 TRMT1Q9NXH9 659 aaKnown RBP19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 MARCH4Q9P2E8 410 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC6A-203ENST00000587818 GOLGA6L3A6NEY3 463 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 IQCF5A8MTL0 148 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 OR56A5P0C7T3 313 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 FGF5P12034 268 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 F8A1P23610 371 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 NPY2RP49146 381 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 RPA4Q13156 261 aa19.48■□□□□ 0.71
TRAPPC6A-203ENST00000587818 BOP1Q14137 746 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms