RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 TRIB2Q92519 343 aa13.54□□□□□ -0.24
CACNA1A-209ENST00000587525 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-209ENST00000587525 IMP4Q96G21 291 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-209ENST00000587525 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-209ENST00000587525 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
CACNA1A-209ENST00000587525 SMIM30A4D0T7 59 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 GABRDO14764 452 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 SERPINA1P01009 418 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 THRBP10828 461 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 ATP6V1E1P36543 226 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 GJA8P48165 433 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 INAQ16352 499 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 MYEOVQ96EZ4 313 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 ZNF419Q96HQ0 510 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 TTPALQ9BTX7 342 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 TLR6Q9Y2C9 796 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 TBX1O43435 398 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 TPST2O60704 377 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 SBK3P0C264 359 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 FCGR1AP12314 374 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 STC1P52823 247 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 C6orf136Q5SQH8 315 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 BROXQ5VW32 411 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 MAMDC4Q6UXC1 1216 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 DOCK3Q8IZD9 2030 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 H3BNH8 94 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 ZNF197O14709 1029 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 CNOT3O75175 753 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 APOA1P02647 267 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 ARCN1P48444 511 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 HCAR3P49019 387 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 RPIAP49247 311 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 RELAQ04206 551 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 XKR6Q5GH73 641 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 PRMT9Q6P2P2 845 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 EFL1Q7Z2Z2 1120 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 LRTM1Q9HBL6 345 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 HMG20AQ9NP66 347 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
CACNA1A-209ENST00000587525 S100A5P33763 92 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 SCNN1AP37088 669 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 BMXP51813 675 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 IL10RBQ08334 325 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 ZBED5Q49AG3 693 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 RTP2Q5QGT7 225 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 KCTD11Q693B1 232 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 TRAPPC5Q8IUR0 188 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 SEPT8Q92599 483 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 PRRG3Q9BZD7 231 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 TESMINQ9Y4I5 508 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 LTBP3Q9NS15 1303 aa13.52□□□□□ -0.24
CACNA1A-209ENST00000587525 SH3PXD2BA1X283 911 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 ADAM12O43184 909 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 SLC6A2P23975 617 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 CHI3L1P36222 383 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 BCAP31P51572 246 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 SLC13A2Q13183 592 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 TMEM236Q5W0B7 351 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 PM20D1Q6GTS8 502 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 ENPP6Q6UWR7 440 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 ADGRG6Q86SQ4 1221 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 Q8N9G6 341 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 TRPV3Q8NET8 790 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 FBXO22Q8NEZ5 403 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 CNIH3Q8TBE1 160 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 IRGQQ8WZA9 623 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 SUSD3Q96L08 255 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 HEPHQ9BQS7 1158 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 UGT2B28Q9BY64 529 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 CFAP97Q9P2B7 532 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 MAP10Q9P2G4 905 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 PRKAB1Q9Y478 270 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 GPC6Q9Y625 555 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 CPQQ9Y646 472 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 FUOMA2VDF0 154 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 ANKRD66B4E2M5 251 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 OTCP00480 354 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 LRG1P02750 347 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 ANXA5P08758 320 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 CSKP41240 450 aa13.52□□□□□ -0.25
CACNA1A-209ENST00000587525 GNPDA1P46926 289 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms