RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CDYLQ9Y232 598 aa12.34□□□□□ -0.43
RETREG3-203ENST00000585894 IGHV1OR21-1A0A087WYE8 117 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 QSOX1O00391 747 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 LIN7AO14910 233 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 PKMP14618 531 aaKnown RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 JUPP14923 745 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 TYRP1P17643 537 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 CHRM3P20309 590 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 MPSTP25325 297 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 AOAHP28039 575 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 CD1CP29017 333 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 MAGEA4P43358 317 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 CFHR1Q03591 330 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 TARDBPQ13148 414 aaKnown RBP eCLIP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 NR1D2Q14995 579 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 RBM20Q5T481 1227 aaKnown RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 TMPRSS7Q7RTY8 843 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 LRRC6Q86X45 466 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 GSPT2Q8IYD1 628 aaKnown RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 ATXN7L3BQ96GX2 97 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 GFM1Q96RP9 751 aaKnown RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 POT1Q9NUX5 634 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
RETREG3-203ENST00000585894 MED16Q9Y2X0 877 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
RETREG3-203ENST00000585894 KLHL33A6NCF5 533 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 D6RAR5 112 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 NTN3O00634 580 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 PFDN6O15212 129 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 AHSGP02765 367 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 ESR1P03372 595 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 PNLIPP16233 465 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 MGAT5Q09328 741 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 CUL1Q13616 776 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 SPIDRQ14159 915 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 PDZD3Q86UT5 571 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 CNTN4Q8IWV2 1026 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 TMEM159Q96B96 161 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
RETREG3-203ENST00000585894 LRRC4CQ9HCJ2 640 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 MOCS1Q9NZB8 636 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 ZFATQ9P243 1243 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 CIDEBQ9UHD4 219 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
RETREG3-203ENST00000585894 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 GPC4O75487 556 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 APOA4P06727 396 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ACADLP28330 430 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 GPR3P46089 330 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 LEPRP48357 1165 aaKnown RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ADARP55265 1226 aaKnown RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ABRQ12979 859 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 RPA4Q13156 261 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PRKG2Q13237 762 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 EFTUD2Q15029 972 aaKnown RBP eCLIP12.31□□□□□ -0.444e-7■■■□□ 16.7
RETREG3-203ENST00000585894 MAP9Q49MG5 647 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 RBM44Q6ZP01 1051 aaKnown RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 OTOAQ7RTW8 1153 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PIM3Q86V86 326 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 TMPRSS12Q86WS5 348 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 LMNTD2Q8IXW0 634 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ACVR1CQ8NER5 493 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 OR5AR1Q8NGP9 310 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 RSC1A1Q92681 617 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 TFGQ92734 400 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PANX3Q96QZ0 392 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 FERD3LQ96RJ6 166 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 HGH1Q9BTY7 390 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 SEMA6CQ9H3T2 930 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 ANKRD12Q6UB98 2062 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 KRT87PA6NCN2 255 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 E5RI56 91 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 IFRD1O00458 451 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 GSTM1P09488 218 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 CDK4P11802 303 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 CLCN7P51798 805 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PPP1CAP62136 330 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 TIAL1Q01085 375 aaKnown RBP eCLIP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 GSTM4Q03013 218 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 FRG1Q14331 258 aaKnown RBP12.31□□□□□ -0.44
RETREG3-203ENST00000585894 KRT33BQ14525 404 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 PLCL1Q15111 1095 aa12.31□□□□□ -0.44
RETREG3-203ENST00000585894 TMED2Q15363 201 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms