RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ACR	P10323	421 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NCF1	P14598	390 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CSF2RA	P15509	400 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ATP6V1B2	P21281	511 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CSTF2	P33240	577 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ARSD	P51689	593 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FOXA1	P55317	472 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PRMT2	P55345	433 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FOXK2	Q01167	660 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DSC1	Q08554	894 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DUSP4	Q13115	394 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PLCL1	Q15111	1095 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM209B	Q5JX69	171 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NAPEPLD	Q6IQ20	393 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RETREG3	Q86VR2	466 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CBR4	Q8N4T8	237 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FBXO30	Q8TB52	745 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MNT	Q99583	582 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	YIPF4	Q9BSR8	244 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NTMT1	Q9BV86	223 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZNF385D	Q9H6B1	395 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NOL6	Q9H6R4	1146 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NT5M	Q9NPB1	228 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SEMA3G	Q9NS98	782 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MBD1	Q9UIS9	605 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HS3ST4	Q9Y661	456 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HEATR9	A2RTY3	570 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MEN1	O00255	615 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TSPAN3	O60637	253 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TYRP1	P17643	537 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CCNA2	P20248	432 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NPY2R	P49146	381 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ADAR	P55265	1226 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DSC2	Q02487	901 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC10A7	Q0GE19	358 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PIK3R6	Q5UE93	754 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CHSY3	Q70JA7	882 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DDIAS	Q8IXT1	998 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	C10orf53	Q8N6V4	93 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NAXE	Q8NCW5	288 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PIK3C3	Q8NEB9	887 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	POC1B	Q8TC44	478 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PABPC5	Q96DU9	382 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PGAP3	Q96FM1	320 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FBXL20	Q96IG2	436 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CASD1	Q96PB1	797 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A0A0U1RQS6	177 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MAGEB16	A2A368	324 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DNAJB5	O75953	348 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ATF6	P18850	670 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ENTPD1	P49961	510 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CSRP3	P50461	194 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM189B	P81408	668 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CTBS	Q01459	385 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KCTD21	Q4G0X4	260 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM205BP	Q63HN1	556 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	AHI1	Q8N157	1196 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DNAJB14	Q8TBM8	379 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	METTL21A	Q8WXB1	218 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HBEGF	Q99075	208 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NAA50	Q9GZZ1	169 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CSNK1G1	Q9HCP0	422 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OLAH	Q9NV23	265 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PCDHB8	Q9UN66	801 aa		11.44	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TDRD15	B5MCY1	1934 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RNF103-CHMP3	A0A140T963	221 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		H3BMM5	538 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	B4GAT1	O43505	415 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PRL	P01236	227 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CYP11A1	P05108	521 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	LINC00032	P0C843	101 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NR4A1	P22736	598 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OXTR	P30559	389 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HCAR3	P49019	387 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	WNT3A	P56704	352 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GRB7	Q14451	532 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	C16orf72	Q14CZ0	275 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PCID2	Q5JVF3	399 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZFP1	Q6P2D0	407 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FUT10	Q6P4F1	479 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TMEM207	Q6UWW9	146 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	LHFPL2	Q6ZUX7	228 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OTOP2	Q7RTS6	562 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM124A	Q86V42	546 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NKAIN4	Q8IVV8	208 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CHERP	Q8IWX8	916 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GAB3	Q8WWW8	586 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	VPS33A	Q96AX1	596 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HMCES	Q96FZ2	354 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PKMYT1	Q99640	499 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CRB3	Q9BUF7	120 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TCAF1	Q9Y4C2	921 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SH3D21	A4FU49	640 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		E9PAM4	449 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms