RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 OR52A4PA6NMU1 304 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 PDZK1P1A8MUH7 402 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 MTX2O75431 263 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 SPAG6O75602 509 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 CREG1O75629 220 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 TIAF1O95411 115 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 PIRTP0C851 137 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 FGF5P12034 268 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 IVDP26440 423 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 RPL10P27635 214 aaKnown RBP20.06■□□□□ 0.8
SRSF1-206ENST00000583741 TNFRSF8P28908 595 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 IFI35P80217 286 aaPredicted RBP20.06■□□□□ 0.8
SRSF1-206ENST00000583741 DNASE1L3Q13609 305 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 FAM92BQ6ZTR7 304 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 ZNF547Q8IVP9 402 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 ZNF567Q8N184 647 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 ZFYVE1Q9HBF4 777 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 LRRC4CQ9HCJ2 640 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 HAUS2Q9NVX0 235 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 WHRNQ9P202 907 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 KLHL8Q9P2G9 620 aaPredicted RBP20.06■□□□□ 0.8
SRSF1-206ENST00000583741 KCND3Q9UK17 655 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 RAB21Q9UL25 225 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 SHOC2Q9UQ13 582 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 PCDHGA6Q9Y5G7 932 aa20.06■□□□□ 0.8
SRSF1-206ENST00000583741 GPR89AB7ZAQ6 455 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 SEC31AO94979 1220 aaKnown RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 SLC4A1P02730 911 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 GPR89BP0CG08 455 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 ZNF7P17097 686 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 CARSP49589 748 aaKnown RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 PPP1CAP62136 330 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 ZBTB17Q13105 803 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 CALCOCO2Q13137 446 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 GPR18Q14330 331 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 KHDC1Q4VXA5 237 aaKnown RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TEX44Q53QW1 395 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 CACHD1Q5VU97 1274 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 CNTD1Q8N815 330 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 BBOF1Q8ND07 529 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 CT55Q8WUE5 264 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 KLHL6Q8WZ60 621 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 GLYATL1Q969I3 302 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TRIB3Q96RU7 358 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 RUFY1Q96T51 708 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 ZSCAN5AQ9BUG6 496 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TRIM55Q9BYV6 548 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 SLC40A1Q9NP59 571 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 POT1Q9NUX5 634 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 GRHL1Q9NZI5 618 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TRHDEQ9UKU6 1024 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 SHANK1Q9Y566 2161 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 MED13Q9UHV7 2174 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 PIPSLA2A3N6 862 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 DNALI1O14645 258 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 JCHAINP01591 159 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 DCDC1P59894 354 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 IZUMO3Q5VZ72 239 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 LRRTM4Q86VH4 590 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 PPP1R3BQ86XI6 285 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TAB3Q8N5C8 712 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 TIMM29Q9BSF4 260 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 ADGRE3Q9BY15 652 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 LHX9Q9NQ69 397 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 NFKBIL1Q9UBC1 381 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-206ENST00000583741 PADI1Q9ULC6 663 aa20.05■□□□□ 0.8
SRSF1-206ENST00000583741 NDC80O14777 642 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 KMOO15229 486 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 CCNYL3P0C7X3 344 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 NELFEP18615 380 aaKnown RBP20.04■□□□□ 0.8
SRSF1-206ENST00000583741 BASP1P80723 227 aaKnown RBP20.04■□□□□ 0.8
SRSF1-206ENST00000583741 IRGCQ6NXR0 463 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 ABRAXAS1Q6UWZ7 409 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 PID1Q7Z2X4 250 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 APLFQ8IW19 511 aaPredicted RBP20.04■□□□□ 0.8
SRSF1-206ENST00000583741 TRAM1L1Q8N609 369 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 TEKT5Q96M29 485 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 AGAP3Q96P47 875 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 ACTL8Q9H568 366 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 AKIRIN1Q9H9L7 192 aaPredicted RBP20.04■□□□□ 0.8
SRSF1-206ENST00000583741 RAB6BQ9NRW1 208 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 NFU1Q9UMS0 254 aa20.04■□□□□ 0.8
SRSF1-206ENST00000583741 GNLYP22749 145 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 ITGA8P53708 1063 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 PLTPP55058 493 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 SEMA5AQ13591 1074 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 ITPRIPL1Q6GPH6 555 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 CAPRIN2Q6IMN6 1127 aaKnown RBP20.03■□□□□ 0.8
SRSF1-206ENST00000583741 TMC3Q7Z5M5 1100 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 PCGF5Q86SE9 256 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 EIF1ADQ8N9N8 165 aaKnown RBP20.03■□□□□ 0.8
SRSF1-206ENST00000583741 FAM129AQ9BZQ8 928 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 EPHA6Q9UF33 1036 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 ANAPC5Q9UJX4 755 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 TMPRSS11EQ9UL52 423 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 WDR37Q9Y2I8 494 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 ZNF711Q9Y462 761 aa20.03■□□□□ 0.8
SRSF1-206ENST00000583741 IGHV5-51A0A0C4DH38 117 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms