RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 LRRC1Q9BTT6 524 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 RABEP2Q9H5N1 569 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 C5AR2Q9P296 337 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 GREB1LQ9C091 1923 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 A0A1W2PS18 150 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 TCRBV21S2A2A0A5A6 115 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ELOVL7A1L3X0 281 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ANKUB1A6NFN9 424 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 SYNGR3O43761 229 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 XPNPEP2O43895 674 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 DKC1O60832 514 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 TOMM70O94826 608 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 BAG4O95429 457 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 LDLRP01130 860 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 APOA4P06727 396 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 MYBL1P10243 752 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ACP2P11117 423 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 CSF2RAP15509 400 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 AMD1P17707 334 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 FOXL2NBQ6ZUU3 175 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF771Q7L3S4 317 aaPredicted RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 CRYBG2Q8N1P7 616 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 TDRD5Q8NAT2 981 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 DMBX1Q8NFW5 382 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 OR5M8Q8NGP6 311 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 LINC00615Q96LM1 132 aaPredicted RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ABHD6Q9BV23 337 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 GPR88Q9GZN0 384 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 ANKRD2Q9GZV1 360 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 OR10A4Q9H209 315 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 EQTNQ9NQ60 294 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 SLC38A7Q9NVC3 462 aa5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 CFDP1Q9UEE9 299 aaPredicted RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-219ENST00000583294 SCN5AQ14524 2016 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPY2A6NKD2 308 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 MEIS2O14770 477 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPAN1O60635 241 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 CTSVO60911 334 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TBX10O75333 385 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 MED24O75448 989 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 H1F0P07305 194 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPY3P0CV98 308 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPY8P0CW00 308 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 GAS1P54826 345 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 CSE1LP55060 971 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TPD52P55327 224 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 PITX1P78337 314 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 RPL36AP83881 106 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPY1Q01534 308 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 PNRC1Q12796 327 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 RALGDSQ12967 914 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF628Q5EBL2 1059 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 C1orf141Q5JVX7 400 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 WBP2NLQ6ICG8 309 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 IQCHQ86VS3 1027 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 L3MBTL4Q8NA19 623 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 EXD1Q8NHP7 514 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 VPS33AQ96AX1 596 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 CTAGE1Q96RT6 745 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 BAG1Q99933 345 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 CNOT10Q9H9A5 744 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 SLC24A2Q9UI40 661 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF580Q9UK33 172 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 PROCRQ9UNN8 238 aa5.28□□□□□ -1.56
SMARCE1-219ENST00000583294 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 EDDM13A0A1B0GTR0 161 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 SMCHD1A6NHR9 2005 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 PDE9AO76083 593 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 SLCO2B1O94956 709 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 IGHV4-39P01824 125 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ATP1A1P05023 1023 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 F7P08709 466 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ILF3Q12906 894 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 NR1D2Q14995 579 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ZNF718Q3SXZ3 478 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ZNF672Q499Z4 452 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 CRY2Q49AN0 593 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 FAM76BQ5HYJ3 339 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 KRT80Q6KB66 452 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 TMPRSS11FQ6ZWK6 438 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 DCP1BQ8IZD4 617 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 CIARTQ8N365 385 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 METTL27Q8N6F8 245 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 PAPD5Q8NDF8 572 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 SPDL1Q96EA4 605 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 C17orf77Q96MU5 243 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 TRAF4Q9BUZ4 470 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 AP1M1Q9BXS5 423 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ZNF556Q9HAH1 456 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 PELI2Q9HAT8 420 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 UPF2Q9HAU5 1272 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 TAAR2Q9P1P5 351 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 ZHX1Q9UKY1 873 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 JRKLQ9Y4A0 524 aa5.27□□□□□ -1.57
SMARCE1-219ENST00000583294 MED19A0JLT2 244 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-219ENST00000583294 FEZF1A0PJY2 475 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms