RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 B3GALT1Q9Y5Z6 326 aa10.64□□□□□ -0.71
NDEL1-208ENST00000580237 ZFYVE26Q68DK2 2539 aa10.64□□□□□ -0.71
NDEL1-208ENST00000580237 SNRNP200O75643 2136 aaKnown RBP10.64□□□□□ -0.71
NDEL1-208ENST00000580237 TCRBV7S3A2A0A539 114 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 UBA6A0AVT1 1052 aaPredicted RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 GSAPA4D1B5 854 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CTAGE9A4FU28 777 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 TOX3O15405 576 aaPredicted RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CD3EAPO15446 510 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 OR1I1O60431 355 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 NDUFS3O75489 264 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 TMEM63AO94886 807 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 C9P02748 559 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PSMA3P25788 255 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 NMBRP28336 390 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CSE1LP55060 971 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 MANEAQ5SRI9 462 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ARHGAP40Q5TG30 622 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ANKRD22Q5VYY1 191 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PTRHD1Q6GMV3 140 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 MRNIPQ6NTE8 343 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CYB5D1Q6P9G0 228 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CES3Q6UWW8 571 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CEACAM20Q6UY09 585 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CCDC81Q6ZN84 652 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ZNF534Q76KX8 674 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 GPR155Q7Z3F1 870 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PRSS42Q7Z5A4 293 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ARHGAP22Q7Z5H3 698 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 LDB1Q86U70 411 aaPredicted RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 MPP5Q8N3R9 675 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ACVR1CQ8NER5 493 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 LCN9Q8WX39 176 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CPT1BQ92523 772 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PMEPA1Q969W9 287 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ZNF669Q96BR6 464 aaPredicted RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 TEFMQ96QE5 360 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CTRCQ99895 268 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 B3GNT4Q9C0J1 378 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 DDX47Q9H0S4 455 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 SRMSQ9H3Y6 488 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ZNF768Q9H5H4 540 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 MRM3Q9HC36 420 aaKnown RBP10.63□□□□□ -0.71
NDEL1-208ENST00000580237 CPNE5Q9HCH3 593 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 TREX1Q9NSU2 369 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 SOHLH2Q9NX45 425 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PDP2Q9P2J9 529 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 GNPTGQ9UJJ9 305 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ACSL6Q9UKU0 697 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 SOX13Q9UN79 622 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PCDHGA3Q9Y5H0 932 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 MAD1L1Q9Y6D9 718 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 PRSS21Q9Y6M0 314 aa10.63□□□□□ -0.71
NDEL1-208ENST00000580237 BPTFQ12830 3046 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 OR6C74A6NCV1 312 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 OR5K3A6NET4 321 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 TLCD2A6NGC4 264 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PRMT5O14744 637 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 POLR1CO15160 346 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 KIF1CO43896 1103 aaKnown RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 KDM1AO60341 852 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 VAPBO95292 243 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 APOA4P06727 396 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PDHA2P29803 388 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PAFAH1B1P43034 410 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 MAGEA6P43360 314 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 ARCN1P48444 511 aaKnown RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 CD151P48509 253 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 EIF3BP55884 814 aaKnown RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PPP1CAP62136 330 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PLOD1Q02809 727 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 SEMA3AQ14563 771 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 TGIF1Q15583 401 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 RNF187Q5TA31 235 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 SDCCAG8Q86SQ7 713 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 VASH2Q86V25 355 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 KLHL7Q8IXQ5 586 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PPIL6Q8IXY8 311 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 IL22RA1Q8N6P7 574 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 SKA2Q8WVK7 121 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 ZFPM2Q8WW38 1151 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 UBXN4Q92575 508 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 TFGQ92734 400 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 MFSD3Q96ES6 412 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 SERPINB12Q96P63 405 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 PANX3Q96QZ0 392 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 CCNL2Q96S94 520 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 CD180Q99467 661 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 ZPBPQ9BS86 351 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 KIFC1Q9BW19 673 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 OR52A5Q9H2C5 316 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 TRIT1Q9H3H1 467 aaKnown RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 MVB12BQ9H7P6 319 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 HRASLS2Q9NWW9 162 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 MARCH4Q9P2E8 410 aaPredicted RBP10.62□□□□□ -0.71
NDEL1-208ENST00000580237 SAR1BQ9Y6B6 198 aa10.62□□□□□ -0.71
NDEL1-208ENST00000580237 CACNA1GO43497 2377 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms