RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 EFNB3Q15768 340 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 PKN2Q16513 984 aaKnown RBP4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 LEXMQ3ZCV2 418 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 MDH1BQ5I0G3 518 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 ALS2CLQ60I27 953 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 SLC18B1Q6NT16 456 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 SIAH3Q8IW03 269 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 C1orf52Q8N6N3 182 aaKnown RBP4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 ARFGAP1Q8N6T3 406 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 TEX9Q8N6V9 391 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 C7orf57Q8NEG2 295 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 APOLD1Q96LR9 279 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 OLFM1Q99784 485 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 FNDC11Q9BVV2 318 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 FOXP1Q9H334 677 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 COMMD8Q9NX08 183 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 SEPT10Q9P0V9 454 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 TRPC4Q9UBN4 977 aa4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 ABT1Q9ULW3 272 aaKnown RBP4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 PA2G4Q9UQ80 394 aaKnown RBP4.53□□□□□ -1.68
TRAPPC8-203ENST00000577474 ANKRD66B4E2M5 251 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TIMM23O14925 209 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 XRCC3O43542 346 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 NDUFS7O75251 213 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 NDUFB8O95169 186 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 OLFM2O95897 454 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 SYF2O95926 243 aaKnown RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 CH25HO95992 272 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 C9P02748 559 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 P4HA1P13674 534 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 CRKLP46109 303 aaKnown RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 NT5C2P49902 561 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 KIAA1024LP59773 190 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 BPIFB3P59826 476 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 PLA2G7Q13093 441 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TAZQ16635 292 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 CCDC158Q5M9N0 1113 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 GCNT6Q5T4J0 391 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TYW3Q6IPR3 259 aaKnown RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 ZNF367Q7RTV3 350 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 ZNF619Q8N2I2 560 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 OCC1Q8TAD7 63 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 RSPH1Q8WYR4 309 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 RAD54LQ92698 747 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 COQ8BQ96D53 544 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 FAM81BQ96LP2 452 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 CPNE1Q99829 537 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 SPXQ9BT56 116 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 LMF2Q9BU23 707 aaKnown RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 KATNB1Q9BVA0 655 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 GTPBP2Q9BX10 602 aaKnown RBP4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 ZNF350Q9GZX5 532 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TNMDQ9H2S6 317 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 THAP9Q9H5L6 903 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 TMEM161AQ9NX61 479 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 HS3ST3B1Q9Y662 390 aa4.52□□□□□ -1.69
TRAPPC8-203ENST00000577474 A0A1W2PPC1 479 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 CCDC69A6NI79 296 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 HEPACAM2A8MVW5 462 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 KCNU1A8MYU2 1149 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 MEIS2O14770 477 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 EIF3DO15371 548 aaKnown RBP eCLIP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 SPRY3O43610 288 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 DDHD2O94830 711 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 CAMTA2O94983 1202 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 EPN2O95208 641 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 GCNT3O95395 438 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 LDLRP01130 860 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 UROSP10746 265 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 ITIH1P19827 911 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 MPGP29372 298 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 TIA1P31483 386 aaKnown RBP eCLIP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 HSD17B3P37058 310 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 FRKP42685 505 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 LHX1P48742 406 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 CLDN20P56880 219 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 DLK1P80370 383 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 TRAF2Q12933 501 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 NPRL3Q12980 569 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 PTGR1Q14914 329 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 LRRC73Q5JTD7 316 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 TXNRD3NBQ6F5E7 133 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 ETFRF1Q6IPR1 90 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 RAB12Q6IQ22 244 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 MFSD12Q6NUT3 480 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 CCNI2Q6ZMN8 369 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 ZNF704Q6ZNC4 412 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 Q6ZSV7 163 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 EXOC3L1Q86VI1 746 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 FOXRED2Q8IWF2 684 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 RTL3Q8N8U3 475 aaKnown RBP4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 OR2AJ1Q8NGZ0 328 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 OR14A16Q8NHC5 309 aa4.51□□□□□ -1.69
TRAPPC8-203ENST00000577474 C16orf52Q8NHV5 167 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms