RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 MCMBPQ9BTE3 642 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 WWP1Q9H0M0 922 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 LRRC4CQ9HCJ2 640 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 LATS2Q9NRM7 1088 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 LRIT1Q9P2V4 623 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 CPNE7Q9UBL6 633 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 PIKFYVEQ9Y2I7 2098 aa10.6□□□□□ -0.71
SLC12A4-215ENST00000575857 A0A1W2PQM1 296 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 TCRBV9S1A1TA0A576 114 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 UBA6A0AVT1 1052 aaPredicted RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 F8W8V4 182 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 H3BMM5 538 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 NTN3O00634 580 aaPredicted RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PFDN6O15212 129 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 B4GAT1O43505 415 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 OPA1O60313 960 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 NIPSNAP2O75323 286 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 TRIM16O95361 564 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 MTHFD1P11586 935 aaKnown RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 CDK4P11802 303 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 AOAHP28039 575 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 ACADLP28330 430 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 CD151P48509 253 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 TIAL1Q01085 375 aaKnown RBP eCLIP10.59□□□□□ -0.711e-9■■■□□ 15.7
SLC12A4-215ENST00000575857 E2F1Q01094 437 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 INSM1Q01101 510 aaPredicted RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 HHEXQ03014 270 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 SOWAHCQ53LP3 525 aaPredicted RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 UBAP2Q5T6F2 1119 aaKnown RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 CDCP2Q5VXM1 449 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PTRHD1Q6GMV3 140 aaKnown RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 DHRS13Q6UX07 377 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 CCNI2Q6ZMN8 369 aaPredicted RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 SPRED1Q7Z699 444 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 SLC9B2Q86UD5 537 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 VRK3Q8IV63 474 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PANX3Q96QZ0 392 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 FMO2Q99518 471 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 AARSD1Q9BTE6 412 aaKnown RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 UCK1Q9HA47 277 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 SLC40A1Q9NP59 571 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 POT1Q9NUX5 634 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 GALPQ9UBC7 116 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 MTRF1LQ9UGC7 380 aaKnown RBP10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PSMD13Q9UNM6 376 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 PSAT1Q9Y617 370 aa10.59□□□□□ -0.71
SLC12A4-215ENST00000575857 COL27A1Q8IZC6 1860 aaPredicted RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 LILRA5A6NI73 299 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 FAM159BA6NKW6 160 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CXorf49A8MYA2 514 aaPredicted RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 PIAS1O75925 651 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SLCO2B1O94956 709 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SLC35G4P0C7Q5 338 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 HALP42357 657 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 GPR3P46089 330 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CLCN7P51798 805 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CLDN6P56747 220 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 OR1D5P58170 312 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CCL7P80098 99 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 PLOD1Q02809 727 aaPredicted RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 BOP1Q14137 746 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CCDC157Q569K6 752 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 DUS1LQ6P1R4 473 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 C3orf62Q6ZUJ4 267 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SLC26A11Q86WA9 606 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SLC22A15Q8IZD6 547 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 EIF1ADQ8N9N8 165 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 AVL9Q8NBF6 648 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 GIMAP7Q8NHV1 300 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 KCNJ9Q92806 393 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CRELD1Q96HD1 420 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 C12orf66Q96MD2 445 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 BBC3Q96PG8 261 aaPredicted RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 SLC30A3Q99726 388 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 TSSK1BQ9BXA7 367 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 FUT8Q9BYC5 575 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 TXLNGYQ9BZA5 131 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 TSPYL1Q9H0U9 437 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 ANKZF1Q9H8Y5 726 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 PPANQ9NQ55 473 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 NINJ2Q9NZG7 142 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 KLHL42Q9P2K6 505 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 NFU1Q9UMS0 254 aa10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 CFAP20Q9Y6A4 193 aaKnown RBP10.58□□□□□ -0.72
SLC12A4-215ENST00000575857 KNTC1P50748 2209 aa10.57□□□□□ -0.72
SLC12A4-215ENST00000575857 IGHV1OR21-1A0A087WYE8 117 aa10.57□□□□□ -0.72
SLC12A4-215ENST00000575857 FAM149AA5PLN7 773 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms