RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 RIMKLBQ9ULI2 386 aa16.98■□□□□ 0.31
SMG6-214ENST00000573827 RELNP78509 3460 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 LRRK2Q5S007 2527 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 CCDC78A2IDD5 438 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 ZSCAN5DPP0CG00 497 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 MSNP26038 577 aaKnown RBP16.97■□□□□ 0.31
SMG6-214ENST00000573827 FDFT1P37268 417 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 KPNA2P52292 529 aaKnown RBP16.97■□□□□ 0.31
SMG6-214ENST00000573827 CDH17Q12864 832 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 KCNAB1Q14722 419 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 KLHL35Q6PF15 583 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 PACS1Q6VY07 963 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 LRRC8AQ8IWT6 810 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 D2HGDHQ8N465 521 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 ZSCAN1Q8NBB4 408 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 LRRC45Q96CN5 670 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 CD180Q99467 661 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 TWSG1Q9GZX9 223 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 TRIT1Q9H3H1 467 aaKnown RBP16.97■□□□□ 0.31
SMG6-214ENST00000573827 HECTD1Q9ULT8 2610 aa16.97■□□□□ 0.31
SMG6-214ENST00000573827 OR6C74A6NCV1 312 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 B8ZZF3 427 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 SPAG6O75602 509 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 AP2A2O94973 939 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 IFNB1P01574 187 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 EBLN1P0CF75 366 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 RPL22P35268 128 aaKnown RBP16.96■□□□□ 0.31
SMG6-214ENST00000573827 PREPP48147 710 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 CD151P48509 253 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 RPA4Q13156 261 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 SNX1Q13596 522 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 BOP1Q14137 746 aaKnown RBP16.96■□□□□ 0.31
SMG6-214ENST00000573827 ITIH4Q14624 930 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 PLCL1Q15111 1095 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 CCNG2Q16589 344 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 SKIDA1Q1XH10 827 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 TAS2R42Q7RTR8 314 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 KMT5CQ86Y97 462 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 ESX1Q8N693 406 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 GALNT6Q8NCL4 622 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 ULBP3Q9BZM4 244 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 GPN2Q9H9Y4 310 aaPredicted RBP16.96■□□□□ 0.31
SMG6-214ENST00000573827 POMT2Q9UKY4 750 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 ZNF148Q9UQR1 794 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 RPS6KL1Q9Y6S9 549 aa16.96■□□□□ 0.31
SMG6-214ENST00000573827 COL12A1Q99715 3063 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 ZNF891A8MT65 544 aaPredicted RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 GOLGA6L6A8MZA4 724 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 BTN3A3O00478 584 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 KIAA0754O94854 1291 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 TPBGLP0DKB5 382 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 ACADLP28330 430 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 OAS2P29728 719 aaKnown RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 SEMA3AQ14563 771 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 CRTC2Q53ET0 693 aaPredicted RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 DNTTIP2Q5QJE6 756 aaKnown RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 TSTD2Q5T7W7 516 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 PWWP2BQ6NUJ5 590 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 FBXO38Q6PIJ6 1188 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 ZNF605Q86T29 641 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 OOSP2Q86WS3 158 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 CARFQ8N187 725 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 HDAC10Q969S8 669 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 ELMO2Q96JJ3 720 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 TFB2MQ9H5Q4 396 aaKnown RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 AKIRIN1Q9H9L7 192 aaPredicted RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 RAB6BQ9NRW1 208 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 DRG1Q9Y295 367 aaKnown RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 BTRCQ9Y297 605 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 MRPS18BQ9Y676 258 aaKnown RBP16.95■□□□□ 0.3
SMG6-214ENST00000573827 PTPN13Q12923 2485 aa16.95■□□□□ 0.3
SMG6-214ENST00000573827 SLC5A10A0PJK1 596 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 HEATR9A2RTY3 570 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 BHMG1C9JSJ3 638 aaPredicted RBP16.94■□□□□ 0.3
SMG6-214ENST00000573827 OR1I1O60431 355 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 GSTM1P09488 218 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 CCDC175P0C221 793 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 ADRA1DP25100 572 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 NDUFS1P28331 727 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 NSG1P42857 185 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 ARCN1P48444 511 aaKnown RBP16.94■□□□□ 0.3
SMG6-214ENST00000573827 GSTM4Q03013 218 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 CDC20Q12834 499 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 TUBB3Q13509 450 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 LAMB3Q13751 1172 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
SMG6-214ENST00000573827 ATP1A1-AS1Q5TC04 95 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 C6orf15Q6UXA7 325 aaPredicted RBP16.94■□□□□ 0.3
SMG6-214ENST00000573827 PPP1R3BQ86XI6 285 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 PHC3Q8NDX5 983 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 OR4E2Q8NGC2 313 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 STARD8Q92502 1023 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 FCRL4Q96PJ5 515 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 PITPNM3Q9BZ71 974 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 EIF2B3Q9NR50 452 aaKnown RBP16.94■□□□□ 0.3
SMG6-214ENST00000573827 GEMIN8Q9NWZ8 242 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms