RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 CDKL2Q92772 493 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 TMEM159Q96B96 161 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 ATXN7L3BQ96GX2 97 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 NDNQ99608 321 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 CCDC3Q9BQI4 270 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 AARSD1Q9BTE6 412 aaKnown RBP10.05□□□□□ -0.8
LITAF-207ENST00000571459 OR52A5Q9H2C5 316 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 CDC42EP4Q9H3Q1 356 aaKnown RBP10.05□□□□□ -0.8
LITAF-207ENST00000571459 ANKZF1Q9H8Y5 726 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 IMP3Q9NV31 184 aaKnown RBP10.05□□□□□ -0.8
LITAF-207ENST00000571459 NSMCE4AQ9NXX6 385 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 GALPQ9UBC7 116 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
LITAF-207ENST00000571459 ANKRD12Q6UB98 2062 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 IFRD1O00458 451 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 CASC3O15234 703 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 B4GAT1O43505 415 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 OPA1O60313 960 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 GPC4O75487 556 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SLCO2B1O94956 709 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 MYBL2P10244 700 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 MTHFD1P11586 935 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 PPM1FP49593 454 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 CLCN7P51798 805 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 CCL7P80098 99 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 E2F1Q01094 437 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 PLOD1Q02809 727 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 ABRQ12979 859 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 KRT33BQ14525 404 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 ERCC6LQ2NKX8 1250 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 KBTBD12Q3ZCT8 623 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 AMZ1Q400G9 498 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 RBM20Q5T481 1227 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 UBAP2Q5T6F2 1119 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 DUS1LQ6P1R4 473 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 CCNI2Q6ZMN8 369 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 TMEM26Q6ZUK4 368 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 PDZD3Q86UT5 571 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SLC26A11Q86WA9 606 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 ZC3HC1Q86WB0 502 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 VRK3Q8IV63 474 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SPNS2Q8IVW8 549 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SLC22A15Q8IZD6 547 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 ZBTB2Q8N680 514 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 PPM1NQ8N819 430 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 GPATCH11Q8N954 259 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 EIF1ADQ8N9N8 165 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 SIDT2Q8NBJ9 832 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 TFGQ92734 400 aaPredicted RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 INPP5DQ92835 1189 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SH3KBP1Q96B97 665 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 FERD3LQ96RJ6 166 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SLC38A3Q99624 504 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 GPR21Q99679 349 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 STN1Q9H668 368 aaKnown RBP10.04□□□□□ -0.8
LITAF-207ENST00000571459 SYNDIG1Q9H7V2 258 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 SLC40A1Q9NP59 571 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 TXNDC16Q9P2K2 825 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 CDYLQ9Y232 598 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 MED16Q9Y2X0 877 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 VWA7Q9Y334 891 aa10.04□□□□□ -0.8
LITAF-207ENST00000571459 PTPRBP23467 1997 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 ZW10O43264 779 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 VPS26AO75436 327 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 DKK1O94907 266 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 C1QAP02745 245 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 RPLP0P05388 317 aaKnown RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 CDK4P11802 303 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 PNLIPP16233 465 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 SAT1P21673 171 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 ACADLP28330 430 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 TNFRSF8P28908 595 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 PHBP35232 272 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 MAPK9P45984 424 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 GPR3P46089 330 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 PMS2P54278 862 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 CDKN2DP55273 166 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 PRKG2Q13237 762 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 GPR18Q14330 331 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 EFTUD2Q15029 972 aaKnown RBP eCLIP10.03□□□□□ -0.84e-13■□□□□ 11.1
LITAF-207ENST00000571459 ACSBG2Q5FVE4 666 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 PLEKHS1Q5SXH7 462 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 HECTD2Q5U5R9 776 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 NKAIN2Q5VXU1 208 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 USP53Q70EK8 1073 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 TRMT10CQ7L0Y3 403 aaKnown RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 SPRED1Q7Z699 444 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 CFAP61Q8NHU2 1237 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 KCNJ9Q92806 393 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 MRRFQ96E11 262 aaKnown RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 CPNE1Q99829 537 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 TBC1D10AQ9BXI6 508 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.03□□□□□ -0.8
LITAF-207ENST00000571459 LRRN3Q9H3W5 708 aa10.03□□□□□ -0.8
LITAF-207ENST00000571459 LATS2Q9NRM7 1088 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms