RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
TVP23B-204ENST00000571018 PCDHGA3Q9Y5H0 932 aa12.37□□□□□ -0.43
TVP23B-204ENST00000571018 HEBP2Q9Y5Z4 205 aa12.37□□□□□ -0.43
TVP23B-204ENST00000571018 COLEC10Q9Y6Z7 277 aa12.37□□□□□ -0.43
TVP23B-204ENST00000571018 APC2O95996 2303 aa12.37□□□□□ -0.43
TVP23B-204ENST00000571018 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 MAGEB16A2A368 324 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 CTAGE9A4FU28 777 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 B4E171 279 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 F8W8V4 182 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 IFRD1O00458 451 aaPredicted RBP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 KLK10O43240 276 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 ARNTP27540 789 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 NDUFS1P28331 727 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 PDHA2P29803 388 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 TSPAN7P41732 249 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 LEPRP48357 1165 aaKnown RBP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 TTPAP49638 278 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 PLCL1Q15111 1095 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 PPP1R7Q15435 360 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 MPP5Q8N3R9 675 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 ART4Q93070 314 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 ZDHHC12Q96GR4 267 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 CAPZA3Q96KX2 299 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 TGM7Q96PF1 710 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 DDA1Q9BW61 102 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 XAB2Q9HCS7 855 aaKnown RBP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
TVP23B-204ENST00000571018 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
TVP23B-204ENST00000571018 FAM237BA0A1B0GVD1 139 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 SLC5A10A0PJK1 596 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 SDR42E2A6NKP2 422 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 EFCAB7A8K855 629 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 FANCGO15287 622 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 VAPBO95292 243 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 CD82P27701 267 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PTGIRP43119 386 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 MAGEA3P43357 314 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PREPP48147 710 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 RAB15P59190 212 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 MC2RQ01718 297 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PLOD1Q02809 727 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 CLN3Q13286 438 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PTK6Q13882 451 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 KRT33BQ14525 404 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 KIAA0930Q6ICG6 404 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PRSS42Q7Z5A4 293 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 LDB1Q86U70 411 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 FAM129CQ86XR2 697 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 ACVR1CQ8NER5 493 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 JPH3Q8WXH2 748 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 ELMO1Q92556 727 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-204ENST00000571018 FERD3LQ96RJ6 166 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 ASPSCR1Q9BZE9 553 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 SLC39A1Q9NY26 324 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 RNF14Q9UBS8 474 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 ACACAQ13085 2346 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 FREM2Q5SZK8 3169 aa12.35□□□□□ -0.43
TVP23B-204ENST00000571018 OR5K3A6NET4 321 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PRMT5O14744 637 aaPredicted RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 KIF1CO43896 1103 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 LIPCP11150 499 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PAMP19021 973 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 ACADLP28330 430 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PAFAH1B1P43034 410 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 ARCN1P48444 511 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 UCNP55089 124 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 BOP1Q14137 746 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 RNASEH2BQ5TBB1 312 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 BROXQ5VW32 411 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 MRNIPQ6NTE8 343 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 IRGCQ6NXR0 463 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 CASC4Q6P4E1 433 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 SYDE1Q6ZW31 735 aaPredicted RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 TMEM135Q86UB9 458 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 KLHL6Q8WZ60 621 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PMEPA1Q969W9 287 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 CRELD1Q96HD1 420 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 TEFMQ96QE5 360 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms