RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 ATXN7L3BQ96GX2 97 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 C12orf66Q96MD2 445 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 TMEM74Q96NL1 305 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 BIRC8Q96P09 236 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 NUDT22Q9BRQ3 303 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CARD6Q9BX69 1037 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 FOXP3Q9BZS1 431 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 NRSN2Q9GZP1 204 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 EPB41L5Q9HCM4 733 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 C20orf96Q9NUD7 363 aaPredicted RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 INTS10Q9NVR2 710 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 GNPTGQ9UJJ9 305 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CHMP2BQ9UQN3 213 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CFAP20Q9Y6A4 193 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 A0A1W2PNU3 283 aaPredicted RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 UBXN7O94888 489 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 S1PR4O95977 384 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ESR1P03372 595 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ITGB6P18564 788 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 SLC1A2P43004 574 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CD151P48509 253 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 EIF3BP55884 814 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 PLOD1Q02809 727 aaPredicted RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 PDIA2Q13087 525 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CTBP1Q13363 440 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 BOP1Q14137 746 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 FASTKD3Q14CZ7 662 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 RTP5Q14D33 572 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 BRD3Q15059 726 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 TRADDQ15628 312 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 SYTL3Q4VX76 610 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 HSP90AA5PQ58FG0 334 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ZNF789Q5FWF6 425 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CTSL3PQ5NE16 218 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 STEAP4Q687X5 459 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 C8orf74Q6P047 294 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 TMEM71Q6P5X7 295 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ZNF449Q6P9G9 518 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 WDR74Q6RFH5 385 aaPredicted RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 NAPRTQ6XQN6 538 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 PDZD3Q86UT5 571 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 KCNMB4Q86W47 210 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 LMNTD2Q8IXW0 634 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 NOA1Q8NC60 698 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 MNS1Q8NEH6 495 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 OR4D9Q8NGE8 314 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CALML6Q8TD86 181 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ZFPM2Q8WW38 1151 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 NXPE2Q96DL1 559 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CFAP36Q96G28 342 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 AHCYL2Q96HN2 611 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 DPYSL5Q9BPU6 564 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 FAM167BQ9BTA0 163 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 LRRC1Q9BTT6 524 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 TSSK1BQ9BXA7 367 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 SEMA6CQ9H3T2 930 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 KIR3DX1Q9H7L2 352 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 OGFRQ9NZT2 677 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 TMEM9Q9P0T7 183 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 ZC3H7BQ9UGR2 993 aaKnown RBP9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 FBXO5Q9UKT4 447 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CDYLQ9Y232 598 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 CRYL1Q9Y2S2 319 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 HEBP2Q9Y5Z4 205 aa9.36□□□□□ -0.91
HCCAT5-201ENST00000569990 FREM2Q5SZK8 3169 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 KNTC1P50748 2209 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 IGHV5-10-1A0A0J9YXX1 117 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 CTAGE15A4D2H0 777 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 H3BMM5 538 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 TMX2-CTNND1H3BSU7 103 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 IFRD1O00458 451 aaPredicted RBP9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 ACACBO00763 2458 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 EIF3HO15372 352 aaKnown RBP eCLIP9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 GPC4O75487 556 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 CAPNS1P04632 268 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 MPOP05164 745 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 PROS1P07225 676 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 F7P08709 466 aaPredicted RBP9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 CTAGE8P0CG41 777 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 ERVK-10P10266 1014 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 PKMP14618 531 aaKnown RBP9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 TYRP1P17643 537 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 AOAHP28039 575 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 ACADLP28330 430 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 NDUFS1P28331 727 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 FMO4P31512 558 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 MAPK9P45984 424 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 PPM1FP49593 454 aaPredicted RBP9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 LIMK2P53671 638 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 PLTPP55058 493 aa9.35□□□□□ -0.91
HCCAT5-201ENST00000569990 CSE1LP55060 971 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms