RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 PFDN6O15212 129 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 NDUFS3O75489 264 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 FGF3P11487 239 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 CCL4P13236 92 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 ARNTP27540 789 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 CASQ1P31415 396 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 MAGEA3P43357 314 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 CAPZBP47756 277 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 ARCN1P48444 511 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 GFERP55789 205 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 ETF1P62495 437 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 DR1Q01658 176 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 KIAA0930Q6ICG6 404 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 DUS1LQ6P1R4 473 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 TMEM135Q86UB9 458 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 RSC1A1Q92681 617 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 USP7Q93009 1102 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 ZDHHC12Q96GR4 267 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 TAAR9Q96RI9 348 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 FERD3LQ96RJ6 166 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 KIR3DX1Q9H7L2 352 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
HERPUD1-218ENST00000569569 SLC5A10A0PJK1 596 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 EFCAB7A8K855 629 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 B4E171 279 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 SNRNP200O75643 2136 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 KRT37O76014 449 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 ANKRD34CP0C6C1 535 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 RPS3P23396 243 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■□□□ 12.8
HERPUD1-218ENST00000569569 TSPAN7P41732 249 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 ABCG1P45844 678 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 PREPP48147 710 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 BRD3Q15059 726 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 ANKRD20A4Q4UJ75 823 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 HOOK3Q86VS8 718 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 ACVR1CQ8NER5 493 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 JPH3Q8WXH2 748 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 NAF1Q96HR8 494 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 TCF12Q99081 682 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 OCIAD1Q9NX40 245 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 RPS6KL1Q9Y6S9 549 aa13.47□□□□□ -0.25
HERPUD1-218ENST00000569569 OR5K3A6NET4 321 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 C9orf172C9J069 976 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 GOLGA8KD6RF30 607 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 GOLGA8TH3BQL2 631 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 USP1O94782 785 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 OGNP20774 298 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 IVDP26440 423 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 ITPKBP27987 946 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 CCR7P32248 378 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 LEPRP48357 1165 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 SYTL3Q4VX76 610 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 RNF187Q5TA31 235 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 PTRHD1Q6GMV3 140 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 NEPROQ6NW34 567 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 IRGCQ6NXR0 463 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 C19orf48Q6RUI8 117 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 NAPRTQ6XQN6 538 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 SYT10Q6XYQ8 523 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 OOSP2Q86WS3 158 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 FAM129CQ86XR2 697 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 BMPERQ8N8U9 685 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 PHC3Q8NDX5 983 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 ASZ1Q8WWH4 475 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 ART4Q93070 314 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 ZNF669Q96BR6 464 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 PANX3Q96QZ0 392 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 TRIM56Q9BRZ2 755 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 P2RY12Q9H244 342 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 HRASLS2Q9NWW9 162 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 PCDHGA3Q9Y5H0 932 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 MAD1L1Q9Y6D9 718 aa13.46□□□□□ -0.25
HERPUD1-218ENST00000569569 SPTBP11277 2137 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms