RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CXorf21Q9HAI6 301 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 PREBQ9HCU5 417 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 GALNT8Q9NY28 637 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ANKRD28O15084 1053 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 LSM1O15116 133 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 TGM5O43548 720 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ANXA6P08133 673 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 RAP2AP10114 183 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 HOXB6P17509 224 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CACNG1Q06432 222 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ZNF177Q13360 481 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ZRANB3Q5FWF4 1079 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 LETMD1Q6P1Q0 360 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 METTL2BQ6P1Q9 378 aaKnown RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CPNE9Q8IYJ1 553 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 PDPRQ8NCN5 879 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 METTL6Q8TCB7 284 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 MAGEE2Q8TD90 523 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-213ENST00000566756 FBXL20Q96IG2 436 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 PPP3R2Q96LZ3 170 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 CGREF1Q99674 301 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 C1orf50Q9BV19 199 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 GORASP2Q9H8Y8 452 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 SLAMF8Q9P0V8 285 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 ACTL7AQ9Y615 435 aa16.49■□□□□ 0.23
CMTM3-213ENST00000566756 OR1I1O60431 355 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 STC2O76061 302 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 CXCL14O95715 111 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 CPNE6O95741 557 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 OTCP00480 354 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 ALBP02768 609 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 ADH1AP07327 375 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 JUNBP17275 347 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-213ENST00000566756 GGT1P19440 569 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 RPS3P23396 243 aaKnown RBP eCLIP16.48■□□□□ 0.23
CMTM3-213ENST00000566756 ALDH3A2P51648 485 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 OR4D2P58180 307 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 EPS8Q12929 822 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 MAD2L1Q13257 205 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-213ENST00000566756 NCEH1Q6PIU2 408 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 CYP20A1Q6UW02 462 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 CCDC149Q6ZUS6 474 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 LYSMD3Q7Z3D4 306 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 RNF38Q9H0F5 515 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 IL21Q9HBE4 155 aa16.48■□□□□ 0.23
CMTM3-213ENST00000566756 PRMT5O14744 637 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 LATS1O95835 1130 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 OLFM2O95897 454 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GLUD1P00367 558 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 S100BP04271 92 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 CAPN1P07384 714 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 BMPR1AP36894 532 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RAB15P59190 212 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 DAG1Q14118 895 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 FAM98BQ52LJ0 330 aaKnown RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 FBXO48Q5FWF7 155 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 SLC2A7Q6PXP3 512 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 FRA10AC1Q70Z53 315 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 TRIM8Q9BZR9 551 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 ACTL8Q9H568 366 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 EBF1Q9UH73 591 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 STOML2Q9UJZ1 356 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RWDD3Q9Y3V2 267 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 ASB1Q9Y576 335 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 PCDHGA11Q9Y5H2 935 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 UPK1AO00322 258 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RAD51BO15315 384 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GMNNO75496 209 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 ARSFP54793 590 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 TRAF2Q12933 501 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GTF2H2Q13888 395 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RAB39AQ14964 217 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 KIAA0040Q15053 153 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 INO80DQ53TQ3 878 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GTF2H2CQ6P1K8 395 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 IL27RAQ6UWB1 636 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GOLGA7Q7Z5G4 137 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 DTWD1Q8N5C7 304 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 GLB1L3Q8NCI6 653 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 VPS50Q96JG6 964 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 EXOC2Q96KP1 924 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 RNF145Q96MT1 663 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 UGT2B28Q9BY64 529 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 LIN28AQ9H9Z2 209 aaKnown RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 NTN4Q9HB63 628 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 ZNF334Q9HCZ1 680 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-213ENST00000566756 SMPD4Q9NXE4 827 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 ASIC5Q9NY37 505 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 IL17CQ9P0M4 197 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 PKP3Q9Y446 797 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 PCDHGC4Q9Y5F7 938 aa16.47■□□□□ 0.23
CMTM3-213ENST00000566756 C2orf78A6NCI8 922 aa16.46■□□□□ 0.23
CMTM3-213ENST00000566756 OR7A17O14581 309 aa16.46■□□□□ 0.23
CMTM3-213ENST00000566756 TLL1O43897 1013 aa16.46■□□□□ 0.23
CMTM3-213ENST00000566756 FZD6O60353 706 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms