RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 STAMQ92783 540 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ISL2Q96A47 359 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NSMCE2Q96MF7 247 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 LRFN5Q96NI6 719 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SORCS2Q96PQ0 1159 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NEU1Q99519 415 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SSX3Q99909 188 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FEM1AQ9BSK4 669 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF436Q9C0F3 470 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF700Q9H0M5 742 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 WDR26Q9H7D7 661 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NT5DC2Q9H857 520 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NOL11Q9H8H0 719 aaKnown RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RNF121Q9H920 327 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RSAD1Q9HA92 442 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 LRRC4Q9HBW1 653 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 RANGRFQ9HD47 186 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 EMC7Q9NPA0 242 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SPAG4Q9NPE6 437 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 VSX1Q9NZR4 365 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MED11Q9P086 117 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 COX16Q9P0S2 106 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 COL20A1Q9P218 1284 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 ARPP21Q9UBL0 812 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 TSR3Q9UJK0 312 aaKnown RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PCDHB10Q9UN67 800 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 PCDHB9Q9Y5E1 797 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 MAGED1Q9Y5V3 778 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 NUBP2Q9Y5Y2 271 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SLC22A7Q9Y694 548 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 FRMPD2Q68DX3 1309 aaPredicted RBP6.21□□□□□ -1.42
PTPN9-204ENST00000564970 CHD4Q14839 1912 aa6.21□□□□□ -1.42
PTPN9-204ENST00000564970 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GLI3P10071 1580 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DENND3A2RUS2 1198 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PI4KAP2A4QPH2 592 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BBIP1A8MTZ0 92 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 TMX2-CTNND1H3BSU7 103 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PIK3R2O00459 728 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 TOR1BO14657 336 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ORC5O43913 435 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GLRA3O75311 464 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SCO1O75880 301 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PAK4O96013 591 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 EPOP01588 193 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GCP02774 474 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DNTTP04053 509 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHRM5P08912 532 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CD63P08962 238 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ACSM4P0C7M7 580 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 OR56A5P0C7T3 313 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 APEHP13798 732 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 HNRNPLP14866 589 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF250P15622 560 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHRM3P20309 590 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 COMTP21964 271 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BMP8BP34820 402 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 RYKP34925 604 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GGT5P36269 586 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 RFC3P40938 356 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GRIA1P42261 906 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BAG6P46379 1132 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 QARSP47897 775 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 MAP2K6P52564 334 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BTG1P62324 171 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF33AQ06730 810 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 TNK2Q07912 1038 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DSC1Q08554 894 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SPIRE1Q08AE8 756 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 KCNH2Q12809 1159 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 NFX1Q12986 1120 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SPP2Q13103 211 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF211Q13398 564 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DDX39BQ13838 428 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CEACAM7Q14002 265 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PUM3Q15397 648 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SMAD2Q15796 467 aaKnown RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHRNA2Q15822 529 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 OCLNQ16625 522 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 GUCA2BQ16661 112 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 UBE2SQ16763 222 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 PPP1R3AQ16821 1122 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 MAP1SQ66K74 1059 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ACAD10Q6JQN1 1059 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 RPL13AP3Q6NVV1 102 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 NOTUMQ6P988 496 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BLOC1S3Q6QNY0 202 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 KCNT2Q6UVM3 1135 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 EPGNQ6UW88 154 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 SUSD1Q6UWL2 747 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 LIPIQ6XZB0 460 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 CHST3Q7LGC8 479 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 BMP8AQ7Z5Y6 402 aa6.2□□□□□ -1.42
PTPN9-204ENST00000564970 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.2□□□□□ -1.42
PTPN9-204ENST00000564970 DHFR2Q86XF0 187 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms