RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HDAC2Q92769 488 aaKnown RBP12.43□□□□□ -0.42
COMMD4-209ENST00000564068 AURKBQ96GD4 344 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-209ENST00000564068 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 MALT1Q9UDY8 824 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 RAB23Q9ULC3 237 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 SLC9A8Q9Y2E8 581 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 SPEF1Q9Y4P9 236 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 CPNE3O75131 537 aaKnown RBP12.43□□□□□ -0.42
COMMD4-209ENST00000564068 NIPSNAP2O75323 286 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 CLCN2P51788 898 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 DGKEP52429 567 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 CASP9P55211 416 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 BEX3Q00994 111 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 HIST2H2ACQ16777 129 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-209ENST00000564068 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 HIST2H2AA3Q6FI13 130 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 Q6ZNX1 250 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 PHACTR4Q8IZ21 702 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 OR6K2Q8NGY2 324 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 OLIG1Q8TAK6 271 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 NELL1Q92832 810 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 GTPBP3Q969Y2 492 aaKnown RBP12.43□□□□□ -0.42
COMMD4-209ENST00000564068 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 NPY6RQ99463 290 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 TBC1D14Q9P2M4 693 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 ENOPH1Q9UHY7 261 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 DNAJC15Q9Y5T4 150 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 CCDC88AQ3V6T2 1871 aa12.43□□□□□ -0.42
COMMD4-209ENST00000564068 TNFRSF11BO00300 401 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 PRMT5O14744 637 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-209ENST00000564068 OR10H3O60404 316 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 EDN1P05305 212 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 NNMTP40261 264 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ITGA1P56199 1179 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 RAB25P57735 213 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 HTRA3P83110 453 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ANKRD26P1Q6NSI1 321 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 C16orf62Q7Z3J2 963 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 MYRFLQ96LU7 910 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 H0YAE9 185 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 C22orf31O95567 290 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 IL6P05231 212 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 SLC6A2P23975 617 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 AGTR2P50052 363 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 PTPN5P54829 565 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 DNAJB13P59910 316 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CAPNS2Q96L46 248 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 A0A1W2PQH9 124 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 KPNA5O15131 536 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 GSTM5P46439 218 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 GTF2H2Q13888 395 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 GTF2H2CQ6P1K8 395 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CARM1Q86X55 608 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CRYBG2Q8N1P7 616 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 MEAF6Q9HAF1 191 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 C14orf119Q9NWQ9 140 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CMTM6Q9NX76 183 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 DERAQ9Y315 318 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CHD4Q14839 1912 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CYP3A5P20815 502 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 HNF4AP41235 474 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CDH12P55289 794 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 MYO9BQ13459 2157 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 MFSD10Q14728 455 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ARMC12Q5T9G4 340 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 TRNP1Q6NT89 227 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-209ENST00000564068 USP43Q70EL4 1123 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF534Q76KX8 674 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 KRT74Q7RTS7 529 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 ZZZ3Q8IYH5 903 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 COLGALT2Q8IYK4 626 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 HS3ST5Q8IZT8 346 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 IRGQQ8WZA9 623 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 NTAN1Q96AB6 310 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 SNX27Q96L92 541 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 KCNC2Q96PR1 638 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 PCDHB5Q9Y5E4 795 aa12.42□□□□□ -0.42
COMMD4-209ENST00000564068 GON4LQ3T8J9 2241 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 A0A1W2PQ67 120 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 MANSC4A6NHS7 340 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 OR6C70A6NIJ9 312 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 AP1G1O43747 822 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 NDST3O95803 873 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FUCA1P04066 466 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ITPKAP23677 461 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 INHBEP58166 350 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms