RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 ATXN7L3BQ96GX2 97 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 NDNQ99608 321 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 POT1Q9NUX5 634 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 LRIT1Q9P2V4 623 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 MED16Q9Y2X0 877 aa13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
AC009163.3-201ENST00000563554 FAM159BA6NKW6 160 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CXorf49A8MYA2 514 aaPredicted RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 IFRD1O00458 451 aaPredicted RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 KPNA5O15131 536 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 NUDT21O43809 227 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 VPS26AO75436 327 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 VIPP01282 170 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 GP1BAP07359 652 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 FASLGP48023 281 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 RPA4Q13156 261 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CLCA4Q14CN2 919 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 RBM20Q5T481 1227 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 DUS1LQ6P1R4 473 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 ZNF549Q6P9A3 640 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 STRA8Q7Z7C7 330 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 ZNF761Q86XN6 746 aaPredicted RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 ASZ1Q8WWH4 475 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CCDC3Q9BQI4 270 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 OR52A5Q9H2C5 316 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 ZNF624Q9P2J8 865 aaPredicted RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CORO1CQ9ULV4 474 aaPredicted RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 PCDHGA1Q9Y5H4 931 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 PSAT1Q9Y617 370 aa13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 CFAP20Q9Y6A4 193 aaKnown RBP13.77□□□□□ -0.21
AC009163.3-201ENST00000563554 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 AHSGP02765 367 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 AOAHP28039 575 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PDHA2P29803 388 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 SLC19A1P41440 591 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PPM1FP49593 454 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 UBE2IP63279 158 aaKnown RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 ILKQ13418 452 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 NAB1Q13506 487 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 RPE65Q16518 533 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 TTLL9Q3SXZ7 439 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 KBTBD12Q3ZCT8 623 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PLEKHS1Q5SXH7 462 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 DGLUCYQ7Z3D6 616 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 ZBTB2Q8N680 514 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PPM1NQ8N819 430 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 SIDT2Q8NBJ9 832 aaKnown RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 ACVR1CQ8NER5 493 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 KCNJ9Q92806 393 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 INSM2Q96T92 566 aaPredicted RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 SLC38A3Q99624 504 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 GPR21Q99679 349 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 FUT8Q9BYC5 575 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 RABGEF1Q9UJ41 708 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 TSR3Q9UJK0 312 aaKnown RBP13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 HEBP2Q9Y5Z4 205 aa13.76□□□□□ -0.21
AC009163.3-201ENST00000563554 PPM1DO15297 605 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 PNLIPP16233 465 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 XRCC1P18887 633 aaPredicted RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 KRT33BQ14525 404 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 CAPRIN2Q6IMN6 1127 aaKnown RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 FAM45BPQ6NSW5 357 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 CYS1Q717R9 158 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 ZNF438Q7Z4V0 828 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 ZC3HC1Q86WB0 502 aaKnown RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 VRK3Q8IV63 474 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 SLC22A15Q8IZD6 547 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 Q8N9G6 341 aaPredicted RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 FAM45AQ8TCE6 357 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 SH3KBP1Q96B97 665 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 VPS39Q96JC1 886 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 ELMO2Q96JJ3 720 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 CPNE1Q99829 537 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 RHOJQ9H4E5 214 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 RAB21Q9UL25 225 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 KNTC1P50748 2209 aa13.75□□□□□ -0.21
AC009163.3-201ENST00000563554 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
AC009163.3-201ENST00000563554 PRAMEF33A0A0G2JMD5 474 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms